Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
C4orf47A7E2U8 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.51■□□□□ 0.39
C4orf47A7E2U8 AL022326.1-202ENST00000641533 845 ntBASIC17.51■□□□□ 0.39
C4orf47A7E2U8 AC092865.6-201ENST00000642101 219 ntBASIC17.51■□□□□ 0.39
C4orf47A7E2U8 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C4orf47A7E2U8 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C4orf47A7E2U8 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
C4orf47A7E2U8 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
C4orf47A7E2U8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
C4orf47A7E2U8 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.51■□□□□ 0.39
C4orf47A7E2U8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
C4orf47A7E2U8 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C4orf47A7E2U8 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C4orf47A7E2U8 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
C4orf47A7E2U8 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 AL024508.2-201ENST00000607749 1894 ntBASIC17.5■□□□□ 0.39
C4orf47A7E2U8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 AC141586.3-201ENST00000562166 1838 ntBASIC17.5■□□□□ 0.39
C4orf47A7E2U8 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 KRT18P27-201ENST00000427733 1299 ntBASIC17.5■□□□□ 0.39
C4orf47A7E2U8 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 C20orf181-201ENST00000623918 480 ntBASIC17.5■□□□□ 0.39
C4orf47A7E2U8 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 AC004408.2-201ENST00000623613 2777 ntBASIC17.5■□□□□ 0.39
C4orf47A7E2U8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.5■□□□□ 0.39
C4orf47A7E2U8 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.49■□□□□ 0.39
C4orf47A7E2U8 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
C4orf47A7E2U8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.49■□□□□ 0.39
C4orf47A7E2U8 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C4orf47A7E2U8 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
C4orf47A7E2U8 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
C4orf47A7E2U8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C4orf47A7E2U8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
C4orf47A7E2U8 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C4orf47A7E2U8 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C4orf47A7E2U8 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C4orf47A7E2U8 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.49■□□□□ 0.39
C4orf47A7E2U8 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.49■□□□□ 0.39
C4orf47A7E2U8 AC073621.1-201ENST00000392730 636 ntBASIC17.49■□□□□ 0.39
C4orf47A7E2U8 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
C4orf47A7E2U8 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.49■□□□□ 0.39
C4orf47A7E2U8 AC136632.2-201ENST00000512891 861 ntBASIC17.49■□□□□ 0.39
C4orf47A7E2U8 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.49■□□□□ 0.39
C4orf47A7E2U8 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.49■□□□□ 0.39
C4orf47A7E2U8 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.49■□□□□ 0.39
C4orf47A7E2U8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C4orf47A7E2U8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C4orf47A7E2U8 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
C4orf47A7E2U8 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.49■□□□□ 0.39
C4orf47A7E2U8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
C4orf47A7E2U8 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
C4orf47A7E2U8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
C4orf47A7E2U8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.48■□□□□ 0.39
C4orf47A7E2U8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
C4orf47A7E2U8 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
C4orf47A7E2U8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
C4orf47A7E2U8 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
C4orf47A7E2U8 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
C4orf47A7E2U8 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
C4orf47A7E2U8 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
C4orf47A7E2U8 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.48■□□□□ 0.39
C4orf47A7E2U8 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.48■□□□□ 0.39
C4orf47A7E2U8 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.48■□□□□ 0.39
C4orf47A7E2U8 COX20P2-201ENST00000452636 358 ntBASIC17.48■□□□□ 0.39
C4orf47A7E2U8 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.48■□□□□ 0.39
C4orf47A7E2U8 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.48■□□□□ 0.39
C4orf47A7E2U8 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.48■□□□□ 0.39
C4orf47A7E2U8 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
C4orf47A7E2U8 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C4orf47A7E2U8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C4orf47A7E2U8 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms