Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
MEIS3P1A6NDR6 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
MEIS3P1A6NDR6 AC069152.1-201ENST00000438030 544 ntBASIC15.42■□□□□ 0.06
MEIS3P1A6NDR6 RPS2P4-201ENST00000476944 856 ntBASIC15.42■□□□□ 0.06
MEIS3P1A6NDR6 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MEIS3P1A6NDR6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC15.42■□□□□ 0.06
MEIS3P1A6NDR6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
MEIS3P1A6NDR6 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.42■□□□□ 0.06
MEIS3P1A6NDR6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC15.42■□□□□ 0.06
MEIS3P1A6NDR6 AC011298.2-201ENST00000617989 482 ntBASIC15.42■□□□□ 0.06
MEIS3P1A6NDR6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.42■□□□□ 0.06
MEIS3P1A6NDR6 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.42■□□□□ 0.06
MEIS3P1A6NDR6 AC133041.1-202ENST00000642053 222 ntBASIC15.42■□□□□ 0.06
MEIS3P1A6NDR6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MEIS3P1A6NDR6 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
MEIS3P1A6NDR6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.42■□□□□ 0.06
MEIS3P1A6NDR6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MEIS3P1A6NDR6 AC034236.2-201ENST00000606662 1610 ntBASIC15.42■□□□□ 0.06
MEIS3P1A6NDR6 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
MEIS3P1A6NDR6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
MEIS3P1A6NDR6 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MEIS3P1A6NDR6 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MEIS3P1A6NDR6 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.42■□□□□ 0.06
MEIS3P1A6NDR6 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
MEIS3P1A6NDR6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MEIS3P1A6NDR6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MEIS3P1A6NDR6 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.42■□□□□ 0.06
MEIS3P1A6NDR6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MEIS3P1A6NDR6 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.42■□□□□ 0.06
MEIS3P1A6NDR6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 NIFKP9-201ENST00000419265 221 ntBASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 AC008040.2-201ENST00000461049 708 ntBASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 GXYLT1P5-201ENST00000614548 1189 ntBASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 GPAT2P1-201ENST00000444924 1672 ntBASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
MEIS3P1A6NDR6 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MEIS3P1A6NDR6 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MEIS3P1A6NDR6 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MEIS3P1A6NDR6 AC009102.3-201ENST00000623118 1491 ntBASIC15.4■□□□□ 0.06
MEIS3P1A6NDR6 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MEIS3P1A6NDR6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
MEIS3P1A6NDR6 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MEIS3P1A6NDR6 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MEIS3P1A6NDR6 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MEIS3P1A6NDR6 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
MEIS3P1A6NDR6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
MEIS3P1A6NDR6 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
MEIS3P1A6NDR6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MEIS3P1A6NDR6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.4■□□□□ 0.06
MEIS3P1A6NDR6 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.4■□□□□ 0.06
MEIS3P1A6NDR6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MEIS3P1A6NDR6 AL023284.2-201ENST00000405850 579 ntBASIC15.4■□□□□ 0.06
MEIS3P1A6NDR6 KRT17P3-201ENST00000420566 1262 ntBASIC15.4■□□□□ 0.06
MEIS3P1A6NDR6 MCCD1P1-208ENST00000445732 328 ntBASIC15.4■□□□□ 0.06
MEIS3P1A6NDR6 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC15.4■□□□□ 0.06
MEIS3P1A6NDR6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC15.4■□□□□ 0.06
MEIS3P1A6NDR6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MEIS3P1A6NDR6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC15.4■□□□□ 0.06
MEIS3P1A6NDR6 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
MEIS3P1A6NDR6 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
MEIS3P1A6NDR6 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MEIS3P1A6NDR6 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MEIS3P1A6NDR6 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms