Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
SHISA3A0PJX4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHISA3A0PJX4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHISA3A0PJX4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SHISA3A0PJX4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SHISA3A0PJX4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.65■□□□□ 0.1
SHISA3A0PJX4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.65■□□□□ 0.1
SHISA3A0PJX4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.65■□□□□ 0.1
SHISA3A0PJX4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHISA3A0PJX4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SHISA3A0PJX4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHISA3A0PJX4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SHISA3A0PJX4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHISA3A0PJX4 AL355802.2-201ENST00000402069 882 ntBASIC15.65■□□□□ 0.1
SHISA3A0PJX4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHISA3A0PJX4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SHISA3A0PJX4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.65■□□□□ 0.1
SHISA3A0PJX4 AC026366.1-201ENST00000488803 879 ntBASIC15.65■□□□□ 0.1
SHISA3A0PJX4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC15.65■□□□□ 0.1
SHISA3A0PJX4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SHISA3A0PJX4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHISA3A0PJX4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
SHISA3A0PJX4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHISA3A0PJX4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SHISA3A0PJX4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC15.65■□□□□ 0.1
SHISA3A0PJX4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHISA3A0PJX4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
SHISA3A0PJX4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHISA3A0PJX4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHISA3A0PJX4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SHISA3A0PJX4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.65■□□□□ 0.1
SHISA3A0PJX4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHISA3A0PJX4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHISA3A0PJX4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.64■□□□□ 0.1
SHISA3A0PJX4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.1
SHISA3A0PJX4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
SHISA3A0PJX4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
SHISA3A0PJX4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHISA3A0PJX4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SHISA3A0PJX4 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHISA3A0PJX4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHISA3A0PJX4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHISA3A0PJX4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHISA3A0PJX4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
SHISA3A0PJX4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.64■□□□□ 0.09
SHISA3A0PJX4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC15.64■□□□□ 0.09
SHISA3A0PJX4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC15.64■□□□□ 0.09
SHISA3A0PJX4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SHISA3A0PJX4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.64■□□□□ 0.09
SHISA3A0PJX4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC15.64■□□□□ 0.09
SHISA3A0PJX4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SHISA3A0PJX4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC15.64■□□□□ 0.09
SHISA3A0PJX4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHISA3A0PJX4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.64■□□□□ 0.09
SHISA3A0PJX4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.64■□□□□ 0.09
SHISA3A0PJX4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
SHISA3A0PJX4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.64■□□□□ 0.09
SHISA3A0PJX4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SHISA3A0PJX4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SHISA3A0PJX4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHISA3A0PJX4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHISA3A0PJX4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHISA3A0PJX4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHISA3A0PJX4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SHISA3A0PJX4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SHISA3A0PJX4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHISA3A0PJX4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.64■□□□□ 0.09
SHISA3A0PJX4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.63■□□□□ 0.09
SHISA3A0PJX4 AC096733.2-201ENST00000609937 1394 ntBASIC15.63■□□□□ 0.09
SHISA3A0PJX4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SHISA3A0PJX4 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
SHISA3A0PJX4 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.63■□□□□ 0.09
SHISA3A0PJX4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHISA3A0PJX4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
SHISA3A0PJX4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
SHISA3A0PJX4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHISA3A0PJX4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SHISA3A0PJX4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SHISA3A0PJX4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SHISA3A0PJX4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHISA3A0PJX4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC15.63■□□□□ 0.09
SHISA3A0PJX4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHISA3A0PJX4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHISA3A0PJX4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SHISA3A0PJX4 KRT18P23-201ENST00000435622 1283 ntBASIC15.63■□□□□ 0.09
SHISA3A0PJX4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHISA3A0PJX4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.63■□□□□ 0.09
SHISA3A0PJX4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC15.63■□□□□ 0.09
SHISA3A0PJX4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.63■□□□□ 0.09
SHISA3A0PJX4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
SHISA3A0PJX4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHISA3A0PJX4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.63■□□□□ 0.09
SHISA3A0PJX4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHISA3A0PJX4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHISA3A0PJX4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SHISA3A0PJX4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.63■□□□□ 0.09
SHISA3A0PJX4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SHISA3A0PJX4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
SHISA3A0PJX4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SHISA3A0PJX4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms