Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV5-4A0A0C4DH59 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.64■□□□□ 0.41
TRBV5-4A0A0C4DH59 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV5-4A0A0C4DH59 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV5-4A0A0C4DH59 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.64■□□□□ 0.41
TRBV5-4A0A0C4DH59 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV5-4A0A0C4DH59 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.64■□□□□ 0.41
TRBV5-4A0A0C4DH59 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV5-4A0A0C4DH59 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV5-4A0A0C4DH59 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TRBV5-4A0A0C4DH59 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.64■□□□□ 0.41
TRBV5-4A0A0C4DH59 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV5-4A0A0C4DH59 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.64■□□□□ 0.41
TRBV5-4A0A0C4DH59 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV5-4A0A0C4DH59 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV5-4A0A0C4DH59 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TRBV5-4A0A0C4DH59 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV5-4A0A0C4DH59 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV5-4A0A0C4DH59 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TRBV5-4A0A0C4DH59 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TRBV5-4A0A0C4DH59 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.63■□□□□ 0.41
TRBV5-4A0A0C4DH59 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV5-4A0A0C4DH59 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV5-4A0A0C4DH59 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV5-4A0A0C4DH59 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.63■□□□□ 0.41
TRBV5-4A0A0C4DH59 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.63■□□□□ 0.41
TRBV5-4A0A0C4DH59 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.63■□□□□ 0.41
TRBV5-4A0A0C4DH59 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
TRBV5-4A0A0C4DH59 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.63■□□□□ 0.41
TRBV5-4A0A0C4DH59 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV5-4A0A0C4DH59 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.63■□□□□ 0.41
TRBV5-4A0A0C4DH59 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TRBV5-4A0A0C4DH59 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
TRBV5-4A0A0C4DH59 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.63■□□□□ 0.41
TRBV5-4A0A0C4DH59 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV5-4A0A0C4DH59 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV5-4A0A0C4DH59 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV5-4A0A0C4DH59 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 REXO1L11P-201ENST00000620964 1927 ntBASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 BX276092.7-203ENST00000637198 1536 ntBASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 AC010460.3-201ENST00000511359 1579 ntBASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 TOB2P1-201ENST00000469761 992 ntBASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 VENTXP7-201ENST00000475503 772 ntBASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TRBV5-4A0A0C4DH59 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 LINC00304-203ENST00000565008 1864 ntBASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 IGHV3-47-201ENST00000425060 335 ntBASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 UPK3BP1-201ENST00000428678 509 ntBASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 AC007967.3-201ENST00000434308 558 ntBASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
TRBV5-4A0A0C4DH59 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms