Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
DDX49Q9Y6V7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.59■■□□□ 1.05
DDX49Q9Y6V7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DDX49Q9Y6V7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
DDX49Q9Y6V7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
DDX49Q9Y6V7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DDX49Q9Y6V7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
DDX49Q9Y6V7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.59■■□□□ 1.05
DDX49Q9Y6V7 AC112907.2-201ENST00000448639 330 ntBASIC21.59■■□□□ 1.05
DDX49Q9Y6V7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.59■■□□□ 1.05
DDX49Q9Y6V7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DDX49Q9Y6V7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.59■■□□□ 1.05
DDX49Q9Y6V7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
DDX49Q9Y6V7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.59■■□□□ 1.05
DDX49Q9Y6V7 AL121894.2-201ENST00000602977 491 ntBASIC21.59■■□□□ 1.05
DDX49Q9Y6V7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.59■■□□□ 1.05
DDX49Q9Y6V7 AL121956.5-201ENST00000625261 221 ntBASIC21.59■■□□□ 1.05
DDX49Q9Y6V7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DDX49Q9Y6V7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
DDX49Q9Y6V7 AC080080.1-201ENST00000625121 2420 ntBASIC21.59■■□□□ 1.05
DDX49Q9Y6V7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC21.59■■□□□ 1.05
DDX49Q9Y6V7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
DDX49Q9Y6V7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
DDX49Q9Y6V7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
DDX49Q9Y6V7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.59■■□□□ 1.05
DDX49Q9Y6V7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC21.59■■□□□ 1.05
DDX49Q9Y6V7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DDX49Q9Y6V7 IER3-202ENST00000376377 1350 ntBASIC21.59■■□□□ 1.05
DDX49Q9Y6V7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
DDX49Q9Y6V7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
DDX49Q9Y6V7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.58■■□□□ 1.05
DDX49Q9Y6V7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
DDX49Q9Y6V7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DDX49Q9Y6V7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
DDX49Q9Y6V7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC21.58■■□□□ 1.05
DDX49Q9Y6V7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DDX49Q9Y6V7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
DDX49Q9Y6V7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.58■■□□□ 1.05
DDX49Q9Y6V7 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.58■■□□□ 1.05
DDX49Q9Y6V7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
DDX49Q9Y6V7 HOMER2P1-201ENST00000455653 964 ntBASIC21.58■■□□□ 1.05
DDX49Q9Y6V7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.58■■□□□ 1.05
DDX49Q9Y6V7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
DDX49Q9Y6V7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.58■■□□□ 1.05
DDX49Q9Y6V7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.58■■□□□ 1.05
DDX49Q9Y6V7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DDX49Q9Y6V7 AL645608.8-201ENST00000606034 2086 ntBASIC21.58■■□□□ 1.05
DDX49Q9Y6V7 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
DDX49Q9Y6V7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
DDX49Q9Y6V7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
DDX49Q9Y6V7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
DDX49Q9Y6V7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
DDX49Q9Y6V7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
DDX49Q9Y6V7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
DDX49Q9Y6V7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC21.58■■□□□ 1.04
DDX49Q9Y6V7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
DDX49Q9Y6V7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
DDX49Q9Y6V7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
DDX49Q9Y6V7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
DDX49Q9Y6V7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC21.58■■□□□ 1.04
DDX49Q9Y6V7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.04
DDX49Q9Y6V7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC21.58■■□□□ 1.04
DDX49Q9Y6V7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX49Q9Y6V7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
DDX49Q9Y6V7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
DDX49Q9Y6V7 PKD1P1-201ENST00000458669 6805 ntBASIC21.57■■□□□ 1.04
DDX49Q9Y6V7 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX49Q9Y6V7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX49Q9Y6V7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX49Q9Y6V7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX49Q9Y6V7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
DDX49Q9Y6V7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.57■■□□□ 1.04
DDX49Q9Y6V7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX49Q9Y6V7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX49Q9Y6V7 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX49Q9Y6V7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX49Q9Y6V7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.57■■□□□ 1.04
DDX49Q9Y6V7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
DDX49Q9Y6V7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX49Q9Y6V7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.57■■□□□ 1.04
DDX49Q9Y6V7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.57■■□□□ 1.04
DDX49Q9Y6V7 SPDYE13P-201ENST00000445314 798 ntBASIC21.57■■□□□ 1.04
DDX49Q9Y6V7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
DDX49Q9Y6V7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.57■■□□□ 1.04
DDX49Q9Y6V7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX49Q9Y6V7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.57■■□□□ 1.04
DDX49Q9Y6V7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.57■■□□□ 1.04
DDX49Q9Y6V7 REXO1L9P-201ENST00000604264 2108 ntBASIC21.57■■□□□ 1.04
DDX49Q9Y6V7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
DDX49Q9Y6V7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
DDX49Q9Y6V7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX49Q9Y6V7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
DDX49Q9Y6V7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
DDX49Q9Y6V7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC21.57■■□□□ 1.04
DDX49Q9Y6V7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX49Q9Y6V7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
DDX49Q9Y6V7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
DDX49Q9Y6V7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
DDX49Q9Y6V7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DDX49Q9Y6V7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms