Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 BCL2-203ENST00000589955 5011 ntBASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 DRAXINP1-201ENST00000437611 948 ntBASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 TOB2P1-201ENST00000469761 992 ntBASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 AC011840.4-201ENST00000578471 627 ntBASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PCDHGC4Q9Y5F7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 HCG4P8-203ENST00000443049 980 ntBASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 LINC00265-3P-201ENST00000447588 903 ntBASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 AC091607.1-201ENST00000490318 1060 ntBASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 AC022898.2-201ENST00000616822 1312 ntBASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PCDHGC4Q9Y5F7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PCDHGC4Q9Y5F7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
PCDHGC4Q9Y5F7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGC4Q9Y5F7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PCDHGC4Q9Y5F7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms