Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 TOB2P1-201ENST00000469761 992 ntBASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 FOSL1P1-201ENST00000511041 816 ntBASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 IGHV3-41-201ENST00000613121 348 ntBASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 Z83836.1-201ENST00000624605 1642 ntBASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PCDHB11Q9Y5F2 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB11Q9Y5F2 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PCDHB11Q9Y5F2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHB11Q9Y5F2 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDHB11Q9Y5F2 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB11Q9Y5F2 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB11Q9Y5F2 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHB11Q9Y5F2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDHB11Q9Y5F2 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.6■□□□□ 0.41
PCDHB11Q9Y5F2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDHB11Q9Y5F2 TPSP2-201ENST00000561760 610 ntBASIC17.6■□□□□ 0.41
PCDHB11Q9Y5F2 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDHB11Q9Y5F2 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHB11Q9Y5F2 AL732292.2-201ENST00000609649 430 ntBASIC17.6■□□□□ 0.41
PCDHB11Q9Y5F2 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHB11Q9Y5F2 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB11Q9Y5F2 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB11Q9Y5F2 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB11Q9Y5F2 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHB11Q9Y5F2 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB11Q9Y5F2 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB11Q9Y5F2 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHB11Q9Y5F2 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHB11Q9Y5F2 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB11Q9Y5F2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHB11Q9Y5F2 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB11Q9Y5F2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
PCDHB11Q9Y5F2 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHB11Q9Y5F2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB11Q9Y5F2 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB11Q9Y5F2 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PCDHB11Q9Y5F2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB11Q9Y5F2 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PCDHB11Q9Y5F2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB11Q9Y5F2 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB11Q9Y5F2 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB11Q9Y5F2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PCDHB11Q9Y5F2 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB11Q9Y5F2 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB11Q9Y5F2 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB11Q9Y5F2 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB11Q9Y5F2 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.59■□□□□ 0.41
PCDHB11Q9Y5F2 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.59■□□□□ 0.41
PCDHB11Q9Y5F2 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHB11Q9Y5F2 AL160237.2-201ENST00000556165 472 ntBASIC17.59■□□□□ 0.41
PCDHB11Q9Y5F2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.59■□□□□ 0.41
PCDHB11Q9Y5F2 RNF126P1-202ENST00000569893 925 ntBASIC17.59■□□□□ 0.41
PCDHB11Q9Y5F2 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.59■□□□□ 0.41
PCDHB11Q9Y5F2 AC005332.3-201ENST00000589904 676 ntBASIC17.59■□□□□ 0.41
PCDHB11Q9Y5F2 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB11Q9Y5F2 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.59■□□□□ 0.41
PCDHB11Q9Y5F2 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PCDHB11Q9Y5F2 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB11Q9Y5F2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB11Q9Y5F2 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB11Q9Y5F2 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB11Q9Y5F2 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PCDHB11Q9Y5F2 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB11Q9Y5F2 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB11Q9Y5F2 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB11Q9Y5F2 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHB11Q9Y5F2 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHB11Q9Y5F2 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHB11Q9Y5F2 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHB11Q9Y5F2 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.58■□□□□ 0.41
PCDHB11Q9Y5F2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHB11Q9Y5F2 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHB11Q9Y5F2 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHB11Q9Y5F2 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHB11Q9Y5F2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
PCDHB11Q9Y5F2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHB11Q9Y5F2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB11Q9Y5F2 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHB11Q9Y5F2 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms