Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 AC011676.5-201ENST00000624864 2660 ntBASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 HLA-L-209ENST00000420110 1011 ntBASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 ADM-205ENST00000528544 586 ntTSL 2 BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 AC006058.3-201ENST00000606217 1069 ntBASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
UBE2D4Q9Y2X8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
UBE2D4Q9Y2X8 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
UBE2D4Q9Y2X8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
UBE2D4Q9Y2X8 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
UBE2D4Q9Y2X8 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC12.52□□□□□ -0.4
UBE2D4Q9Y2X8 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
UBE2D4Q9Y2X8 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
UBE2D4Q9Y2X8 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC12.52□□□□□ -0.4
UBE2D4Q9Y2X8 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC12.52□□□□□ -0.4
UBE2D4Q9Y2X8 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
UBE2D4Q9Y2X8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
UBE2D4Q9Y2X8 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
UBE2D4Q9Y2X8 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
UBE2D4Q9Y2X8 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
UBE2D4Q9Y2X8 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
UBE2D4Q9Y2X8 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC12.52□□□□□ -0.4
UBE2D4Q9Y2X8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC12.52□□□□□ -0.4
UBE2D4Q9Y2X8 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC12.52□□□□□ -0.41
UBE2D4Q9Y2X8 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UBE2D4Q9Y2X8 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UBE2D4Q9Y2X8 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UBE2D4Q9Y2X8 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
UBE2D4Q9Y2X8 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC12.52□□□□□ -0.41
UBE2D4Q9Y2X8 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC12.52□□□□□ -0.41
UBE2D4Q9Y2X8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
UBE2D4Q9Y2X8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC12.52□□□□□ -0.41
UBE2D4Q9Y2X8 MIR935-201ENST00000401179 91 ntBASIC12.52□□□□□ -0.41
UBE2D4Q9Y2X8 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC12.52□□□□□ -0.41
UBE2D4Q9Y2X8 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UBE2D4Q9Y2X8 TK2-204ENST00000525974 1178 ntTSL 2 BASIC12.52□□□□□ -0.41
UBE2D4Q9Y2X8 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC12.52□□□□□ -0.41
UBE2D4Q9Y2X8 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
UBE2D4Q9Y2X8 TBCB-214ENST00000629269 413 ntTSL 5 BASIC12.52□□□□□ -0.41
UBE2D4Q9Y2X8 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UBE2D4Q9Y2X8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC12.52□□□□□ -0.41
UBE2D4Q9Y2X8 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UBE2D4Q9Y2X8 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC12.52□□□□□ -0.41
UBE2D4Q9Y2X8 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
UBE2D4Q9Y2X8 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
UBE2D4Q9Y2X8 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
UBE2D4Q9Y2X8 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UBE2D4Q9Y2X8 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UBE2D4Q9Y2X8 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
UBE2D4Q9Y2X8 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC12.52□□□□□ -0.41
UBE2D4Q9Y2X8 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC12.52□□□□□ -0.41
UBE2D4Q9Y2X8 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UBE2D4Q9Y2X8 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
UBE2D4Q9Y2X8 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms