Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.05■□□□□ 0.16
SSR3Q9UNL2 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SSR3Q9UNL2 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.05■□□□□ 0.16
SSR3Q9UNL2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSR3Q9UNL2 SOX15-203ENST00000570788 1093 ntBASIC16.05■□□□□ 0.16
SSR3Q9UNL2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC16.05■□□□□ 0.16
SSR3Q9UNL2 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.05■□□□□ 0.16
SSR3Q9UNL2 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.05■□□□□ 0.16
SSR3Q9UNL2 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSR3Q9UNL2 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSR3Q9UNL2 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSR3Q9UNL2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SSR3Q9UNL2 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SSR3Q9UNL2 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SSR3Q9UNL2 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSR3Q9UNL2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSR3Q9UNL2 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.04■□□□□ 0.16
SSR3Q9UNL2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSR3Q9UNL2 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSR3Q9UNL2 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSR3Q9UNL2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSR3Q9UNL2 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
SSR3Q9UNL2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSR3Q9UNL2 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSR3Q9UNL2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSR3Q9UNL2 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SSR3Q9UNL2 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSR3Q9UNL2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSR3Q9UNL2 MIR564-202ENST00000385049 94 ntBASIC16.04■□□□□ 0.16
SSR3Q9UNL2 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.04■□□□□ 0.16
SSR3Q9UNL2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.04■□□□□ 0.16
SSR3Q9UNL2 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SSR3Q9UNL2 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.04■□□□□ 0.16
SSR3Q9UNL2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SSR3Q9UNL2 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.04■□□□□ 0.16
SSR3Q9UNL2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SSR3Q9UNL2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.04■□□□□ 0.16
SSR3Q9UNL2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SSR3Q9UNL2 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSR3Q9UNL2 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSR3Q9UNL2 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSR3Q9UNL2 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SSR3Q9UNL2 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.04■□□□□ 0.16
SSR3Q9UNL2 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.04■□□□□ 0.16
SSR3Q9UNL2 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.04■□□□□ 0.16
SSR3Q9UNL2 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSR3Q9UNL2 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SSR3Q9UNL2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 KRT8P50-201ENST00000562022 1438 ntBASIC16.03■□□□□ 0.16
SSR3Q9UNL2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 AC087623.3-201ENST00000607047 1098 ntBASIC16.03■□□□□ 0.16
SSR3Q9UNL2 MIR6821-201ENST00000617625 74 ntBASIC16.03■□□□□ 0.16
SSR3Q9UNL2 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 AC106886.4-201ENST00000623557 2502 ntBASIC16.03■□□□□ 0.16
SSR3Q9UNL2 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSR3Q9UNL2 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.02■□□□□ 0.16
SSR3Q9UNL2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SSR3Q9UNL2 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms