Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBQLN1Q9UMX0 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBQLN1Q9UMX0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
UBQLN1Q9UMX0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBQLN1Q9UMX0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBQLN1Q9UMX0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBQLN1Q9UMX0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
UBQLN1Q9UMX0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBQLN1Q9UMX0 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.23■□□□□ 0.67
UBQLN1Q9UMX0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
UBQLN1Q9UMX0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.23■□□□□ 0.67
UBQLN1Q9UMX0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
UBQLN1Q9UMX0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.23■□□□□ 0.67
UBQLN1Q9UMX0 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
UBQLN1Q9UMX0 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBQLN1Q9UMX0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBQLN1Q9UMX0 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBQLN1Q9UMX0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBQLN1Q9UMX0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBQLN1Q9UMX0 SAPCD2P3-201ENST00000455031 850 ntBASIC19.23■□□□□ 0.67
UBQLN1Q9UMX0 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
UBQLN1Q9UMX0 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBQLN1Q9UMX0 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.23■□□□□ 0.67
UBQLN1Q9UMX0 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
UBQLN1Q9UMX0 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.23■□□□□ 0.67
UBQLN1Q9UMX0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.23■□□□□ 0.67
UBQLN1Q9UMX0 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
UBQLN1Q9UMX0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.23■□□□□ 0.67
UBQLN1Q9UMX0 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.23■□□□□ 0.67
UBQLN1Q9UMX0 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.23■□□□□ 0.67
UBQLN1Q9UMX0 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.23■□□□□ 0.67
UBQLN1Q9UMX0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
UBQLN1Q9UMX0 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.23■□□□□ 0.67
UBQLN1Q9UMX0 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBQLN1Q9UMX0 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBQLN1Q9UMX0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.23■□□□□ 0.67
UBQLN1Q9UMX0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.23■□□□□ 0.67
UBQLN1Q9UMX0 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.23■□□□□ 0.67
UBQLN1Q9UMX0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.23■□□□□ 0.67
UBQLN1Q9UMX0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
UBQLN1Q9UMX0 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN1Q9UMX0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN1Q9UMX0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN1Q9UMX0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN1Q9UMX0 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN1Q9UMX0 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN1Q9UMX0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN1Q9UMX0 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN1Q9UMX0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN1Q9UMX0 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.22■□□□□ 0.67
UBQLN1Q9UMX0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN1Q9UMX0 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
UBQLN1Q9UMX0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN1Q9UMX0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN1Q9UMX0 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN1Q9UMX0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.22■□□□□ 0.67
UBQLN1Q9UMX0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.22■□□□□ 0.67
UBQLN1Q9UMX0 FAM220CP-201ENST00000395253 831 ntBASIC19.22■□□□□ 0.67
UBQLN1Q9UMX0 AC007967.3-201ENST00000434308 558 ntBASIC19.22■□□□□ 0.67
UBQLN1Q9UMX0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.22■□□□□ 0.67
UBQLN1Q9UMX0 AC132008.2-207ENST00000454517 770 ntBASIC19.22■□□□□ 0.67
UBQLN1Q9UMX0 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN1Q9UMX0 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.22■□□□□ 0.67
UBQLN1Q9UMX0 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.22■□□□□ 0.67
UBQLN1Q9UMX0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN1Q9UMX0 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.22■□□□□ 0.67
UBQLN1Q9UMX0 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.22■□□□□ 0.67
UBQLN1Q9UMX0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN1Q9UMX0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN1Q9UMX0 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN1Q9UMX0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN1Q9UMX0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
UBQLN1Q9UMX0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN1Q9UMX0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
UBQLN1Q9UMX0 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
UBQLN1Q9UMX0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN1Q9UMX0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.21■□□□□ 0.67
UBQLN1Q9UMX0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN1Q9UMX0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN1Q9UMX0 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN1Q9UMX0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN1Q9UMX0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN1Q9UMX0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN1Q9UMX0 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN1Q9UMX0 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN1Q9UMX0 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN1Q9UMX0 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
UBQLN1Q9UMX0 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
UBQLN1Q9UMX0 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN1Q9UMX0 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.21■□□□□ 0.67
UBQLN1Q9UMX0 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN1Q9UMX0 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN1Q9UMX0 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN1Q9UMX0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN1Q9UMX0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.21■□□□□ 0.67
UBQLN1Q9UMX0 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
UBQLN1Q9UMX0 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN1Q9UMX0 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.21■□□□□ 0.67
UBQLN1Q9UMX0 AC116407.2-201ENST00000613639 860 ntBASIC19.21■□□□□ 0.67
UBQLN1Q9UMX0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms