Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.61■□□□□ 0.89
SYNPO2Q9UMS6 MTDHP4-201ENST00000600287 670 ntBASIC20.61■□□□□ 0.89
SYNPO2Q9UMS6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.61■□□□□ 0.89
SYNPO2Q9UMS6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SYNPO2Q9UMS6 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SYNPO2Q9UMS6 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNPO2Q9UMS6 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.61■□□□□ 0.89
SYNPO2Q9UMS6 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNPO2Q9UMS6 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.61■□□□□ 0.89
SYNPO2Q9UMS6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNPO2Q9UMS6 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYNPO2Q9UMS6 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYNPO2Q9UMS6 AC243591.1-201ENST00000452967 1364 ntBASIC20.6■□□□□ 0.89
SYNPO2Q9UMS6 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SYNPO2Q9UMS6 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.6■□□□□ 0.89
SYNPO2Q9UMS6 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYNPO2Q9UMS6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.6■□□□□ 0.89
SYNPO2Q9UMS6 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SYNPO2Q9UMS6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SYNPO2Q9UMS6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SYNPO2Q9UMS6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SYNPO2Q9UMS6 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SYNPO2Q9UMS6 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.6■□□□□ 0.89
SYNPO2Q9UMS6 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
SYNPO2Q9UMS6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.6■□□□□ 0.89
SYNPO2Q9UMS6 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.6■□□□□ 0.89
SYNPO2Q9UMS6 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.6■□□□□ 0.89
SYNPO2Q9UMS6 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.6■□□□□ 0.89
SYNPO2Q9UMS6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SYNPO2Q9UMS6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SYNPO2Q9UMS6 AC019129.2-201ENST00000609837 1235 ntBASIC20.6■□□□□ 0.89
SYNPO2Q9UMS6 AC008735.5-201ENST00000623544 497 ntBASIC20.6■□□□□ 0.89
SYNPO2Q9UMS6 AC073592.5-201ENST00000624854 528 ntBASIC20.6■□□□□ 0.89
SYNPO2Q9UMS6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SYNPO2Q9UMS6 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYNPO2Q9UMS6 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SYNPO2Q9UMS6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.6■□□□□ 0.89
SYNPO2Q9UMS6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
SYNPO2Q9UMS6 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYNPO2Q9UMS6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYNPO2Q9UMS6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SYNPO2Q9UMS6 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SYNPO2Q9UMS6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SYNPO2Q9UMS6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SYNPO2Q9UMS6 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.59■□□□□ 0.89
SYNPO2Q9UMS6 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.59■□□□□ 0.89
SYNPO2Q9UMS6 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SYNPO2Q9UMS6 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SYNPO2Q9UMS6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.59■□□□□ 0.89
SYNPO2Q9UMS6 OR7E14P-202ENST00000530490 1290 ntBASIC20.59■□□□□ 0.89
SYNPO2Q9UMS6 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.59■□□□□ 0.89
SYNPO2Q9UMS6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.59■□□□□ 0.89
SYNPO2Q9UMS6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.59■□□□□ 0.89
SYNPO2Q9UMS6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SYNPO2Q9UMS6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SYNPO2Q9UMS6 HLA-J-201ENST00000462773 1622 ntBASIC20.59■□□□□ 0.89
SYNPO2Q9UMS6 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SYNPO2Q9UMS6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.59■□□□□ 0.89
SYNPO2Q9UMS6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SYNPO2Q9UMS6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SYNPO2Q9UMS6 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.59■□□□□ 0.89
SYNPO2Q9UMS6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.58■□□□□ 0.89
SYNPO2Q9UMS6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SYNPO2Q9UMS6 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SYNPO2Q9UMS6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SYNPO2Q9UMS6 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
SYNPO2Q9UMS6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.58■□□□□ 0.89
SYNPO2Q9UMS6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYNPO2Q9UMS6 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SYNPO2Q9UMS6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.58■□□□□ 0.89
SYNPO2Q9UMS6 AC003669.1-201ENST00000334569 611 ntBASIC20.58■□□□□ 0.89
SYNPO2Q9UMS6 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.58■□□□□ 0.89
SYNPO2Q9UMS6 RPS2P1-201ENST00000434010 821 ntBASIC20.58■□□□□ 0.89
SYNPO2Q9UMS6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYNPO2Q9UMS6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYNPO2Q9UMS6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.58■□□□□ 0.89
SYNPO2Q9UMS6 AC002558.1-201ENST00000488906 803 ntBASIC20.58■□□□□ 0.89
SYNPO2Q9UMS6 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.58■□□□□ 0.89
SYNPO2Q9UMS6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.58■□□□□ 0.89
SYNPO2Q9UMS6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.58■□□□□ 0.89
SYNPO2Q9UMS6 AL049840.3-201ENST00000602669 611 ntBASIC20.58■□□□□ 0.89
SYNPO2Q9UMS6 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.58■□□□□ 0.89
SYNPO2Q9UMS6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SYNPO2Q9UMS6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SYNPO2Q9UMS6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
SYNPO2Q9UMS6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SYNPO2Q9UMS6 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SYNPO2Q9UMS6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SYNPO2Q9UMS6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SYNPO2Q9UMS6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYNPO2Q9UMS6 AC100803.2-201ENST00000562459 1963 ntBASIC20.57■□□□□ 0.88
SYNPO2Q9UMS6 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.57■□□□□ 0.88
SYNPO2Q9UMS6 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.57■□□□□ 0.88
SYNPO2Q9UMS6 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SYNPO2Q9UMS6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYNPO2Q9UMS6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SYNPO2Q9UMS6 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.57■□□□□ 0.88
SYNPO2Q9UMS6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.57■□□□□ 0.88
SYNPO2Q9UMS6 AL020989.1-201ENST00000422979 469 ntBASIC20.57■□□□□ 0.88
SYNPO2Q9UMS6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms