Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.39■□□□□ 0.38
CPNE7Q9UBL6 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CPNE7Q9UBL6 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
CPNE7Q9UBL6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.39■□□□□ 0.38
CPNE7Q9UBL6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE7Q9UBL6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE7Q9UBL6 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE7Q9UBL6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.39■□□□□ 0.37
CPNE7Q9UBL6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE7Q9UBL6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.39■□□□□ 0.37
CPNE7Q9UBL6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE7Q9UBL6 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE7Q9UBL6 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE7Q9UBL6 AC132008.2-207ENST00000454517 770 ntBASIC17.39■□□□□ 0.37
CPNE7Q9UBL6 AF238378.1-201ENST00000526806 358 ntBASIC17.39■□□□□ 0.37
CPNE7Q9UBL6 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.39■□□□□ 0.37
CPNE7Q9UBL6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE7Q9UBL6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.39■□□□□ 0.37
CPNE7Q9UBL6 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.39■□□□□ 0.37
CPNE7Q9UBL6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE7Q9UBL6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE7Q9UBL6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.39■□□□□ 0.37
CPNE7Q9UBL6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE7Q9UBL6 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE7Q9UBL6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE7Q9UBL6 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE7Q9UBL6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.39■□□□□ 0.37
CPNE7Q9UBL6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.39■□□□□ 0.37
CPNE7Q9UBL6 INTS4P1-201ENST00000438455 1935 ntBASIC17.39■□□□□ 0.37
CPNE7Q9UBL6 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE7Q9UBL6 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE7Q9UBL6 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE7Q9UBL6 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CPNE7Q9UBL6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CPNE7Q9UBL6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE7Q9UBL6 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.38■□□□□ 0.37
CPNE7Q9UBL6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE7Q9UBL6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.38■□□□□ 0.37
CPNE7Q9UBL6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE7Q9UBL6 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE7Q9UBL6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.38■□□□□ 0.37
CPNE7Q9UBL6 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE7Q9UBL6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
CPNE7Q9UBL6 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE7Q9UBL6 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.38■□□□□ 0.37
CPNE7Q9UBL6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE7Q9UBL6 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE7Q9UBL6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE7Q9UBL6 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE7Q9UBL6 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE7Q9UBL6 FDX1P1-201ENST00000449115 551 ntBASIC17.38■□□□□ 0.37
CPNE7Q9UBL6 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.38■□□□□ 0.37
CPNE7Q9UBL6 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.38■□□□□ 0.37
CPNE7Q9UBL6 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE7Q9UBL6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.38■□□□□ 0.37
CPNE7Q9UBL6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.38■□□□□ 0.37
CPNE7Q9UBL6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CPNE7Q9UBL6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CPNE7Q9UBL6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE7Q9UBL6 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE7Q9UBL6 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.38■□□□□ 0.37
CPNE7Q9UBL6 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CPNE7Q9UBL6 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE7Q9UBL6 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
CPNE7Q9UBL6 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CPNE7Q9UBL6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE7Q9UBL6 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 AC090164.3-201ENST00000610780 2143 ntBASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPNE7Q9UBL6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms