Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.46■□□□□ 0.23
LRFN1Q9P244 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN1Q9P244 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.46■□□□□ 0.23
LRFN1Q9P244 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN1Q9P244 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.46■□□□□ 0.23
LRFN1Q9P244 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN1Q9P244 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN1Q9P244 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN1Q9P244 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN1Q9P244 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.46■□□□□ 0.23
LRFN1Q9P244 AC125634.1-201ENST00000438758 1403 ntBASIC16.46■□□□□ 0.23
LRFN1Q9P244 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
LRFN1Q9P244 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LRFN1Q9P244 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN1Q9P244 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN1Q9P244 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN1Q9P244 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.46■□□□□ 0.23
LRFN1Q9P244 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
LRFN1Q9P244 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN1Q9P244 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN1Q9P244 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN1Q9P244 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN1Q9P244 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.46■□□□□ 0.23
LRFN1Q9P244 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LRFN1Q9P244 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN1Q9P244 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.46■□□□□ 0.23
LRFN1Q9P244 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
LRFN1Q9P244 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN1Q9P244 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN1Q9P244 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
LRFN1Q9P244 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN1Q9P244 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LRFN1Q9P244 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN1Q9P244 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN1Q9P244 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.46■□□□□ 0.23
LRFN1Q9P244 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.46■□□□□ 0.23
LRFN1Q9P244 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN1Q9P244 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN1Q9P244 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN1Q9P244 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
LRFN1Q9P244 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
LRFN1Q9P244 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LRFN1Q9P244 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRFN1Q9P244 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRFN1Q9P244 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRFN1Q9P244 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LRFN1Q9P244 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRFN1Q9P244 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.45■□□□□ 0.22
LRFN1Q9P244 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRFN1Q9P244 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRFN1Q9P244 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRFN1Q9P244 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LRFN1Q9P244 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.45■□□□□ 0.22
LRFN1Q9P244 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRFN1Q9P244 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
LRFN1Q9P244 AL662844.1-201ENST00000546340 181 ntBASIC16.45■□□□□ 0.22
LRFN1Q9P244 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRFN1Q9P244 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRFN1Q9P244 AC132938.6-201ENST00000623828 1655 ntBASIC16.45■□□□□ 0.22
LRFN1Q9P244 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRFN1Q9P244 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRFN1Q9P244 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRFN1Q9P244 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.45■□□□□ 0.22
LRFN1Q9P244 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRFN1Q9P244 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.45■□□□□ 0.22
LRFN1Q9P244 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
LRFN1Q9P244 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LRFN1Q9P244 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.45■□□□□ 0.22
LRFN1Q9P244 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRFN1Q9P244 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRFN1Q9P244 PHGDH-209ENST00000641074 1780 ntBASIC16.44■□□□□ 0.22
LRFN1Q9P244 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRFN1Q9P244 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRFN1Q9P244 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LRFN1Q9P244 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
LRFN1Q9P244 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
LRFN1Q9P244 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRFN1Q9P244 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRFN1Q9P244 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.44■□□□□ 0.22
LRFN1Q9P244 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.44■□□□□ 0.22
LRFN1Q9P244 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRFN1Q9P244 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.44■□□□□ 0.22
LRFN1Q9P244 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRFN1Q9P244 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.44■□□□□ 0.22
LRFN1Q9P244 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.44■□□□□ 0.22
LRFN1Q9P244 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.44■□□□□ 0.22
LRFN1Q9P244 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.44■□□□□ 0.22
LRFN1Q9P244 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.44■□□□□ 0.22
LRFN1Q9P244 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.44■□□□□ 0.22
LRFN1Q9P244 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.44■□□□□ 0.22
LRFN1Q9P244 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRFN1Q9P244 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
LRFN1Q9P244 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRFN1Q9P244 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRFN1Q9P244 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
LRFN1Q9P244 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRFN1Q9P244 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRFN1Q9P244 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
LRFN1Q9P244 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRFN1Q9P244 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms