Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
THUMPD1Q9NXG2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
THUMPD1Q9NXG2 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THUMPD1Q9NXG2 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.92■□□□□ 0.3
THUMPD1Q9NXG2 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.92■□□□□ 0.3
THUMPD1Q9NXG2 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
THUMPD1Q9NXG2 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THUMPD1Q9NXG2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
THUMPD1Q9NXG2 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
THUMPD1Q9NXG2 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.92■□□□□ 0.3
THUMPD1Q9NXG2 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.92■□□□□ 0.3
THUMPD1Q9NXG2 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THUMPD1Q9NXG2 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THUMPD1Q9NXG2 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
THUMPD1Q9NXG2 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.92■□□□□ 0.3
THUMPD1Q9NXG2 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
THUMPD1Q9NXG2 HMGA1P5-201ENST00000412453 271 ntBASIC16.92■□□□□ 0.3
THUMPD1Q9NXG2 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
THUMPD1Q9NXG2 SEC1P-202ENST00000473944 940 ntBASIC16.92■□□□□ 0.3
THUMPD1Q9NXG2 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
THUMPD1Q9NXG2 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
THUMPD1Q9NXG2 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.92■□□□□ 0.3
THUMPD1Q9NXG2 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THUMPD1Q9NXG2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.92■□□□□ 0.3
THUMPD1Q9NXG2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THUMPD1Q9NXG2 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
THUMPD1Q9NXG2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.92■□□□□ 0.3
THUMPD1Q9NXG2 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
THUMPD1Q9NXG2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
THUMPD1Q9NXG2 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THUMPD1Q9NXG2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.92■□□□□ 0.3
THUMPD1Q9NXG2 AC141586.5-201ENST00000624546 2050 ntBASIC16.92■□□□□ 0.3
THUMPD1Q9NXG2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 MIR4497-201ENST00000583208 89 ntBASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
THUMPD1Q9NXG2 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
THUMPD1Q9NXG2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
THUMPD1Q9NXG2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.9■□□□□ 0.3
THUMPD1Q9NXG2 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.9■□□□□ 0.3
THUMPD1Q9NXG2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.9■□□□□ 0.3
THUMPD1Q9NXG2 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
THUMPD1Q9NXG2 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.9■□□□□ 0.3
THUMPD1Q9NXG2 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
THUMPD1Q9NXG2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
THUMPD1Q9NXG2 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
THUMPD1Q9NXG2 AC099343.3-201ENST00000605834 2503 ntBASIC16.9■□□□□ 0.3
THUMPD1Q9NXG2 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
THUMPD1Q9NXG2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.9■□□□□ 0.3
THUMPD1Q9NXG2 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.9■□□□□ 0.3
THUMPD1Q9NXG2 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
THUMPD1Q9NXG2 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
THUMPD1Q9NXG2 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
THUMPD1Q9NXG2 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
THUMPD1Q9NXG2 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
THUMPD1Q9NXG2 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
THUMPD1Q9NXG2 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.9■□□□□ 0.3
THUMPD1Q9NXG2 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
THUMPD1Q9NXG2 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.9■□□□□ 0.3
THUMPD1Q9NXG2 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
THUMPD1Q9NXG2 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
THUMPD1Q9NXG2 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
THUMPD1Q9NXG2 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
THUMPD1Q9NXG2 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
THUMPD1Q9NXG2 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
THUMPD1Q9NXG2 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
THUMPD1Q9NXG2 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms