Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHB16Q9NRJ7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PCDHB16Q9NRJ7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 GPAT2P1-201ENST00000444924 1672 ntBASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 MIR149-201ENST00000384879 89 ntBASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 MESTP1-201ENST00000404287 994 ntBASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 KRT8P50-201ENST00000562022 1438 ntBASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 AC009102.3-201ENST00000623118 1491 ntBASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.65■□□□□ 0.1
PCDHB16Q9NRJ7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.64■□□□□ 0.1
PCDHB16Q9NRJ7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB16Q9NRJ7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB16Q9NRJ7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB16Q9NRJ7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB16Q9NRJ7 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB16Q9NRJ7 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
PCDHB16Q9NRJ7 REXO1L9P-201ENST00000604264 2108 ntBASIC15.64■□□□□ 0.09
PCDHB16Q9NRJ7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.64■□□□□ 0.09
PCDHB16Q9NRJ7 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDHB16Q9NRJ7 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
PCDHB16Q9NRJ7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB16Q9NRJ7 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB16Q9NRJ7 ESPNP-201ENST00000270691 2015 ntBASIC15.64■□□□□ 0.09
PCDHB16Q9NRJ7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PCDHB16Q9NRJ7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PCDHB16Q9NRJ7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB16Q9NRJ7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PCDHB16Q9NRJ7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PCDHB16Q9NRJ7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDHB16Q9NRJ7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.64■□□□□ 0.09
PCDHB16Q9NRJ7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDHB16Q9NRJ7 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB16Q9NRJ7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
PCDHB16Q9NRJ7 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
PCDHB16Q9NRJ7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB16Q9NRJ7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.64■□□□□ 0.09
PCDHB16Q9NRJ7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.64■□□□□ 0.09
PCDHB16Q9NRJ7 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.64■□□□□ 0.09
PCDHB16Q9NRJ7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB16Q9NRJ7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB16Q9NRJ7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
PCDHB16Q9NRJ7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
PCDHB16Q9NRJ7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB16Q9NRJ7 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB16Q9NRJ7 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms