Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PAAF1Q9BRP4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PAAF1Q9BRP4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
PAAF1Q9BRP4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PAAF1Q9BRP4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.1■□□□□ 0.65
PAAF1Q9BRP4 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.1■□□□□ 0.65
PAAF1Q9BRP4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.1■□□□□ 0.65
PAAF1Q9BRP4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.1■□□□□ 0.65
PAAF1Q9BRP4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.1■□□□□ 0.65
PAAF1Q9BRP4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.1■□□□□ 0.65
PAAF1Q9BRP4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.1■□□□□ 0.65
PAAF1Q9BRP4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.1■□□□□ 0.65
PAAF1Q9BRP4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
PAAF1Q9BRP4 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PAAF1Q9BRP4 AC025062.2-201ENST00000605477 670 ntBASIC19.1■□□□□ 0.65
PAAF1Q9BRP4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.1■□□□□ 0.65
PAAF1Q9BRP4 AC116407.3-201ENST00000623905 1129 ntBASIC19.1■□□□□ 0.65
PAAF1Q9BRP4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
PAAF1Q9BRP4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PAAF1Q9BRP4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PAAF1Q9BRP4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
PAAF1Q9BRP4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PAAF1Q9BRP4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PAAF1Q9BRP4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PAAF1Q9BRP4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.1■□□□□ 0.65
PAAF1Q9BRP4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.1■□□□□ 0.65
PAAF1Q9BRP4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PAAF1Q9BRP4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.09■□□□□ 0.65
PAAF1Q9BRP4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PAAF1Q9BRP4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PAAF1Q9BRP4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PAAF1Q9BRP4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PAAF1Q9BRP4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.09■□□□□ 0.65
PAAF1Q9BRP4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PAAF1Q9BRP4 REXO1L9P-201ENST00000604264 2108 ntBASIC19.09■□□□□ 0.65
PAAF1Q9BRP4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PAAF1Q9BRP4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PAAF1Q9BRP4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PAAF1Q9BRP4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PAAF1Q9BRP4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PAAF1Q9BRP4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PAAF1Q9BRP4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.09■□□□□ 0.65
PAAF1Q9BRP4 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PAAF1Q9BRP4 AC012640.2-201ENST00000561606 901 ntBASIC19.09■□□□□ 0.65
PAAF1Q9BRP4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PAAF1Q9BRP4 AC139887.3-201ENST00000568585 713 ntBASIC19.09■□□□□ 0.65
PAAF1Q9BRP4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PAAF1Q9BRP4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PAAF1Q9BRP4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.09■□□□□ 0.65
PAAF1Q9BRP4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PAAF1Q9BRP4 AC004817.3-201ENST00000602957 2129 ntBASIC19.09■□□□□ 0.65
PAAF1Q9BRP4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.09■□□□□ 0.65
PAAF1Q9BRP4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.08■□□□□ 0.65
PAAF1Q9BRP4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PAAF1Q9BRP4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PAAF1Q9BRP4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
PAAF1Q9BRP4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PAAF1Q9BRP4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
PAAF1Q9BRP4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PAAF1Q9BRP4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PAAF1Q9BRP4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
PAAF1Q9BRP4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PAAF1Q9BRP4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
PAAF1Q9BRP4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PAAF1Q9BRP4 AC009113.1-201ENST00000570267 2443 ntBASIC19.08■□□□□ 0.64
PAAF1Q9BRP4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PAAF1Q9BRP4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
PAAF1Q9BRP4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PAAF1Q9BRP4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.08■□□□□ 0.64
PAAF1Q9BRP4 MIR574-201ENST00000385209 96 ntBASIC19.08■□□□□ 0.64
PAAF1Q9BRP4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
PAAF1Q9BRP4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.08■□□□□ 0.64
PAAF1Q9BRP4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.08■□□□□ 0.64
PAAF1Q9BRP4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PAAF1Q9BRP4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.08■□□□□ 0.64
PAAF1Q9BRP4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.08■□□□□ 0.64
PAAF1Q9BRP4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.08■□□□□ 0.64
PAAF1Q9BRP4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.08■□□□□ 0.64
PAAF1Q9BRP4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PAAF1Q9BRP4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.08■□□□□ 0.64
PAAF1Q9BRP4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PAAF1Q9BRP4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PAAF1Q9BRP4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
PAAF1Q9BRP4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PAAF1Q9BRP4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.08■□□□□ 0.64
PAAF1Q9BRP4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PAAF1Q9BRP4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PAAF1Q9BRP4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.07■□□□□ 0.64
PAAF1Q9BRP4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.07■□□□□ 0.64
PAAF1Q9BRP4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PAAF1Q9BRP4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PAAF1Q9BRP4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PAAF1Q9BRP4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PAAF1Q9BRP4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PAAF1Q9BRP4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PAAF1Q9BRP4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
PAAF1Q9BRP4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PAAF1Q9BRP4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PAAF1Q9BRP4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PAAF1Q9BRP4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms