Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
YME1L1Q96TA2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
YME1L1Q96TA2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
YME1L1Q96TA2 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
YME1L1Q96TA2 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
YME1L1Q96TA2 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
YME1L1Q96TA2 PMPCAP1-201ENST00000508114 1576 ntBASIC19.23■□□□□ 0.67
YME1L1Q96TA2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.23■□□□□ 0.67
YME1L1Q96TA2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
YME1L1Q96TA2 AC004817.3-201ENST00000602957 2129 ntBASIC19.22■□□□□ 0.67
YME1L1Q96TA2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
YME1L1Q96TA2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
YME1L1Q96TA2 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
YME1L1Q96TA2 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.22■□□□□ 0.67
YME1L1Q96TA2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
YME1L1Q96TA2 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
YME1L1Q96TA2 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.22■□□□□ 0.67
YME1L1Q96TA2 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.22■□□□□ 0.67
YME1L1Q96TA2 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
YME1L1Q96TA2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.22■□□□□ 0.67
YME1L1Q96TA2 AC136632.2-201ENST00000512891 861 ntBASIC19.22■□□□□ 0.67
YME1L1Q96TA2 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.22■□□□□ 0.67
YME1L1Q96TA2 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.22■□□□□ 0.67
YME1L1Q96TA2 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.22■□□□□ 0.67
YME1L1Q96TA2 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.22■□□□□ 0.67
YME1L1Q96TA2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
YME1L1Q96TA2 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.22■□□□□ 0.67
YME1L1Q96TA2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.22■□□□□ 0.67
YME1L1Q96TA2 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
YME1L1Q96TA2 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.22■□□□□ 0.67
YME1L1Q96TA2 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
YME1L1Q96TA2 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
YME1L1Q96TA2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
YME1L1Q96TA2 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
YME1L1Q96TA2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
YME1L1Q96TA2 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
YME1L1Q96TA2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
YME1L1Q96TA2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
YME1L1Q96TA2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.21■□□□□ 0.67
YME1L1Q96TA2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
YME1L1Q96TA2 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.21■□□□□ 0.67
YME1L1Q96TA2 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.21■□□□□ 0.67
YME1L1Q96TA2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.21■□□□□ 0.67
YME1L1Q96TA2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
YME1L1Q96TA2 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.21■□□□□ 0.67
YME1L1Q96TA2 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.21■□□□□ 0.67
YME1L1Q96TA2 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.21■□□□□ 0.67
YME1L1Q96TA2 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.21■□□□□ 0.67
YME1L1Q96TA2 AL596442.2-201ENST00000610240 980 ntBASIC19.21■□□□□ 0.67
YME1L1Q96TA2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
YME1L1Q96TA2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.21■□□□□ 0.67
YME1L1Q96TA2 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
YME1L1Q96TA2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
YME1L1Q96TA2 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.21■□□□□ 0.67
YME1L1Q96TA2 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
YME1L1Q96TA2 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
YME1L1Q96TA2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YME1L1Q96TA2 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
YME1L1Q96TA2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YME1L1Q96TA2 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.2■□□□□ 0.66
YME1L1Q96TA2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YME1L1Q96TA2 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YME1L1Q96TA2 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YME1L1Q96TA2 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
YME1L1Q96TA2 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YME1L1Q96TA2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.2■□□□□ 0.66
YME1L1Q96TA2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.2■□□□□ 0.66
YME1L1Q96TA2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YME1L1Q96TA2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.2■□□□□ 0.66
YME1L1Q96TA2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
YME1L1Q96TA2 AP006288.1-201ENST00000446065 395 ntBASIC19.2■□□□□ 0.66
YME1L1Q96TA2 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.2■□□□□ 0.66
YME1L1Q96TA2 AC073592.4-201ENST00000623827 446 ntBASIC19.2■□□□□ 0.66
YME1L1Q96TA2 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.2■□□□□ 0.66
YME1L1Q96TA2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YME1L1Q96TA2 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.2■□□□□ 0.66
YME1L1Q96TA2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YME1L1Q96TA2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.2■□□□□ 0.66
YME1L1Q96TA2 AC022898.2-201ENST00000616822 1312 ntBASIC19.2■□□□□ 0.66
YME1L1Q96TA2 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
YME1L1Q96TA2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.2■□□□□ 0.66
YME1L1Q96TA2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.2■□□□□ 0.66
YME1L1Q96TA2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
YME1L1Q96TA2 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
YME1L1Q96TA2 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
YME1L1Q96TA2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
YME1L1Q96TA2 GMCL1P1-201ENST00000463439 1581 ntBASIC19.19■□□□□ 0.66
YME1L1Q96TA2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.19■□□□□ 0.66
YME1L1Q96TA2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
YME1L1Q96TA2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
YME1L1Q96TA2 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.19■□□□□ 0.66
YME1L1Q96TA2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
YME1L1Q96TA2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
YME1L1Q96TA2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.19■□□□□ 0.66
YME1L1Q96TA2 AC073621.1-201ENST00000392730 636 ntBASIC19.19■□□□□ 0.66
YME1L1Q96TA2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.19■□□□□ 0.66
YME1L1Q96TA2 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.19■□□□□ 0.66
YME1L1Q96TA2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
YME1L1Q96TA2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.19■□□□□ 0.66
YME1L1Q96TA2 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms