Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL21A1Q96P44 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL21A1Q96P44 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL21A1Q96P44 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL21A1Q96P44 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL21A1Q96P44 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
COL21A1Q96P44 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL21A1Q96P44 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.01■□□□□ 0.31
COL21A1Q96P44 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.01■□□□□ 0.31
COL21A1Q96P44 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL21A1Q96P44 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.01■□□□□ 0.31
COL21A1Q96P44 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.01■□□□□ 0.31
COL21A1Q96P44 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.01■□□□□ 0.31
COL21A1Q96P44 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
COL21A1Q96P44 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.01■□□□□ 0.31
COL21A1Q96P44 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.01■□□□□ 0.31
COL21A1Q96P44 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL21A1Q96P44 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL21A1Q96P44 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.01■□□□□ 0.31
COL21A1Q96P44 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL21A1Q96P44 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
COL21A1Q96P44 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL21A1Q96P44 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL21A1Q96P44 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.01■□□□□ 0.31
COL21A1Q96P44 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.01■□□□□ 0.31
COL21A1Q96P44 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL21A1Q96P44 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17■□□□□ 0.31
COL21A1Q96P44 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL21A1Q96P44 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL21A1Q96P44 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
COL21A1Q96P44 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17■□□□□ 0.31
COL21A1Q96P44 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL21A1Q96P44 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
COL21A1Q96P44 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL21A1Q96P44 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL21A1Q96P44 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL21A1Q96P44 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL21A1Q96P44 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL21A1Q96P44 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
COL21A1Q96P44 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL21A1Q96P44 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL21A1Q96P44 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17■□□□□ 0.31
COL21A1Q96P44 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17■□□□□ 0.31
COL21A1Q96P44 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17■□□□□ 0.31
COL21A1Q96P44 HOMER2P1-201ENST00000455653 964 ntBASIC17■□□□□ 0.31
COL21A1Q96P44 AC092647.4-201ENST00000457211 535 ntBASIC17■□□□□ 0.31
COL21A1Q96P44 DUX4L26-201ENST00000489078 1255 ntBASIC17■□□□□ 0.31
COL21A1Q96P44 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
COL21A1Q96P44 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL21A1Q96P44 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL21A1Q96P44 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL21A1Q96P44 MIR3917-201ENST00000580971 93 ntBASIC17■□□□□ 0.31
COL21A1Q96P44 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL21A1Q96P44 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
COL21A1Q96P44 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17■□□□□ 0.31
COL21A1Q96P44 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
COL21A1Q96P44 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17■□□□□ 0.31
COL21A1Q96P44 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL21A1Q96P44 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
COL21A1Q96P44 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL21A1Q96P44 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL21A1Q96P44 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL21A1Q96P44 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
COL21A1Q96P44 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL21A1Q96P44 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
COL21A1Q96P44 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL21A1Q96P44 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL21A1Q96P44 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL21A1Q96P44 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL21A1Q96P44 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
COL21A1Q96P44 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
COL21A1Q96P44 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
COL21A1Q96P44 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
COL21A1Q96P44 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL21A1Q96P44 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.99■□□□□ 0.31
COL21A1Q96P44 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.99■□□□□ 0.31
COL21A1Q96P44 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL21A1Q96P44 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL21A1Q96P44 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
COL21A1Q96P44 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
COL21A1Q96P44 AC009053.2-201ENST00000563701 2365 ntBASIC16.99■□□□□ 0.31
COL21A1Q96P44 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL21A1Q96P44 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.99■□□□□ 0.31
COL21A1Q96P44 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL21A1Q96P44 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.99■□□□□ 0.31
COL21A1Q96P44 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COL21A1Q96P44 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL21A1Q96P44 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.99■□□□□ 0.31
COL21A1Q96P44 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.99■□□□□ 0.31
COL21A1Q96P44 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL21A1Q96P44 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COL21A1Q96P44 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.99■□□□□ 0.31
COL21A1Q96P44 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.99■□□□□ 0.31
COL21A1Q96P44 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COL21A1Q96P44 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.99■□□□□ 0.31
COL21A1Q96P44 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL21A1Q96P44 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL21A1Q96P44 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL21A1Q96P44 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL21A1Q96P44 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms