Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.31■□□□□ 0.52
RTP4Q96DX8 LTB4R2-202ENST00000528054 3092 ntBASIC18.31■□□□□ 0.52
RTP4Q96DX8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTP4Q96DX8 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.31■□□□□ 0.52
RTP4Q96DX8 HLA-J-201ENST00000462773 1622 ntBASIC18.31■□□□□ 0.52
RTP4Q96DX8 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.31■□□□□ 0.52
RTP4Q96DX8 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTP4Q96DX8 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
RTP4Q96DX8 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTP4Q96DX8 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTP4Q96DX8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.31■□□□□ 0.52
RTP4Q96DX8 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTP4Q96DX8 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTP4Q96DX8 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTP4Q96DX8 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.31■□□□□ 0.52
RTP4Q96DX8 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RTP4Q96DX8 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTP4Q96DX8 FAM8A6P-201ENST00000407496 1135 ntBASIC18.31■□□□□ 0.52
RTP4Q96DX8 YBX1P2-201ENST00000489612 999 ntBASIC18.31■□□□□ 0.52
RTP4Q96DX8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.31■□□□□ 0.52
RTP4Q96DX8 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTP4Q96DX8 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
RTP4Q96DX8 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.31■□□□□ 0.52
RTP4Q96DX8 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTP4Q96DX8 AC009154.2-201ENST00000621177 724 ntBASIC18.31■□□□□ 0.52
RTP4Q96DX8 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTP4Q96DX8 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RTP4Q96DX8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.31■□□□□ 0.52
RTP4Q96DX8 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTP4Q96DX8 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTP4Q96DX8 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
RTP4Q96DX8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RTP4Q96DX8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTP4Q96DX8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTP4Q96DX8 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RTP4Q96DX8 REXO1L11P-201ENST00000620964 1927 ntBASIC18.31■□□□□ 0.52
RTP4Q96DX8 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTP4Q96DX8 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RTP4Q96DX8 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTP4Q96DX8 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTP4Q96DX8 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RTP4Q96DX8 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.3■□□□□ 0.52
RTP4Q96DX8 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTP4Q96DX8 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTP4Q96DX8 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTP4Q96DX8 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RTP4Q96DX8 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTP4Q96DX8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.3■□□□□ 0.52
RTP4Q96DX8 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.3■□□□□ 0.52
RTP4Q96DX8 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.3■□□□□ 0.52
RTP4Q96DX8 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.3■□□□□ 0.52
RTP4Q96DX8 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.3■□□□□ 0.52
RTP4Q96DX8 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTP4Q96DX8 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.3■□□□□ 0.52
RTP4Q96DX8 AC004263.2-201ENST00000617183 678 ntBASIC18.3■□□□□ 0.52
RTP4Q96DX8 LINC01451-201ENST00000623792 534 ntBASIC18.3■□□□□ 0.52
RTP4Q96DX8 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.3■□□□□ 0.52
RTP4Q96DX8 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.3■□□□□ 0.52
RTP4Q96DX8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
RTP4Q96DX8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.3■□□□□ 0.52
RTP4Q96DX8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTP4Q96DX8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RTP4Q96DX8 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RTP4Q96DX8 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTP4Q96DX8 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RTP4Q96DX8 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RTP4Q96DX8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
RTP4Q96DX8 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTP4Q96DX8 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.29■□□□□ 0.52
RTP4Q96DX8 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.29■□□□□ 0.52
RTP4Q96DX8 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RTP4Q96DX8 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTP4Q96DX8 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTP4Q96DX8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTP4Q96DX8 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTP4Q96DX8 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.29■□□□□ 0.52
RTP4Q96DX8 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTP4Q96DX8 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTP4Q96DX8 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTP4Q96DX8 TSPY5P-201ENST00000426936 936 ntBASIC18.29■□□□□ 0.52
RTP4Q96DX8 KRT18P48-201ENST00000434763 852 ntBASIC18.29■□□□□ 0.52
RTP4Q96DX8 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.29■□□□□ 0.52
RTP4Q96DX8 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.29■□□□□ 0.52
RTP4Q96DX8 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.29■□□□□ 0.52
RTP4Q96DX8 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RTP4Q96DX8 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.29■□□□□ 0.52
RTP4Q96DX8 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTP4Q96DX8 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTP4Q96DX8 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
RTP4Q96DX8 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTP4Q96DX8 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTP4Q96DX8 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTP4Q96DX8 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTP4Q96DX8 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTP4Q96DX8 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTP4Q96DX8 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTP4Q96DX8 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTP4Q96DX8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.28■□□□□ 0.52
RTP4Q96DX8 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.28■□□□□ 0.52
RTP4Q96DX8 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms