Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS1Q92902 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS1Q92902 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS1Q92902 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS1Q92902 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS1Q92902 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS1Q92902 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HPS1Q92902 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.47■□□□□ 0.23
HPS1Q92902 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HPS1Q92902 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS1Q92902 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS1Q92902 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS1Q92902 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS1Q92902 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS1Q92902 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HPS1Q92902 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS1Q92902 NIFKP9-201ENST00000419265 221 ntBASIC16.47■□□□□ 0.23
HPS1Q92902 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.47■□□□□ 0.23
HPS1Q92902 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS1Q92902 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.47■□□□□ 0.23
HPS1Q92902 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.47■□□□□ 0.23
HPS1Q92902 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.47■□□□□ 0.23
HPS1Q92902 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS1Q92902 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
HPS1Q92902 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
HPS1Q92902 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS1Q92902 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HPS1Q92902 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS1Q92902 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.47■□□□□ 0.23
HPS1Q92902 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HPS1Q92902 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.47■□□□□ 0.23
HPS1Q92902 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.47■□□□□ 0.23
HPS1Q92902 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS1Q92902 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.47■□□□□ 0.23
HPS1Q92902 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
HPS1Q92902 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS1Q92902 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS1Q92902 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS1Q92902 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HPS1Q92902 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HPS1Q92902 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HPS1Q92902 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
HPS1Q92902 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HPS1Q92902 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HPS1Q92902 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HPS1Q92902 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HPS1Q92902 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.46■□□□□ 0.23
HPS1Q92902 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
HPS1Q92902 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HPS1Q92902 PCDHA1-201ENST00000378133 2726 ntBASIC16.46■□□□□ 0.23
HPS1Q92902 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
HPS1Q92902 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HPS1Q92902 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HPS1Q92902 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HPS1Q92902 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HPS1Q92902 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.46■□□□□ 0.23
HPS1Q92902 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HPS1Q92902 C1QL1P1-201ENST00000568105 661 ntBASIC16.46■□□□□ 0.23
HPS1Q92902 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.46■□□□□ 0.23
HPS1Q92902 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HPS1Q92902 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HPS1Q92902 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
HPS1Q92902 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HPS1Q92902 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HPS1Q92902 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HPS1Q92902 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HPS1Q92902 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HPS1Q92902 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HPS1Q92902 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.46■□□□□ 0.23
HPS1Q92902 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
HPS1Q92902 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HPS1Q92902 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HPS1Q92902 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.46■□□□□ 0.22
HPS1Q92902 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HPS1Q92902 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPS1Q92902 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HPS1Q92902 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.45■□□□□ 0.22
HPS1Q92902 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
HPS1Q92902 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
HPS1Q92902 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HPS1Q92902 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HPS1Q92902 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.45■□□□□ 0.22
HPS1Q92902 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPS1Q92902 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.45■□□□□ 0.22
HPS1Q92902 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPS1Q92902 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.45■□□□□ 0.22
HPS1Q92902 RBM17P1-201ENST00000453646 1190 ntBASIC16.45■□□□□ 0.22
HPS1Q92902 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
HPS1Q92902 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.45■□□□□ 0.22
HPS1Q92902 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.45■□□□□ 0.22
HPS1Q92902 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.45■□□□□ 0.22
HPS1Q92902 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.45■□□□□ 0.22
HPS1Q92902 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPS1Q92902 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
HPS1Q92902 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HPS1Q92902 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HPS1Q92902 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.45■□□□□ 0.22
HPS1Q92902 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HPS1Q92902 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HPS1Q92902 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms