Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNED1Q8TER0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC21.73■■□□□ 1.07
SNED1Q8TER0 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.73■■□□□ 1.07
SNED1Q8TER0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNED1Q8TER0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNED1Q8TER0 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNED1Q8TER0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNED1Q8TER0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNED1Q8TER0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNED1Q8TER0 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC21.72■■□□□ 1.07
SNED1Q8TER0 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC21.72■■□□□ 1.07
SNED1Q8TER0 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC21.72■■□□□ 1.07
SNED1Q8TER0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC21.72■■□□□ 1.07
SNED1Q8TER0 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC21.72■■□□□ 1.07
SNED1Q8TER0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNED1Q8TER0 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC21.72■■□□□ 1.07
SNED1Q8TER0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNED1Q8TER0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SNED1Q8TER0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNED1Q8TER0 AC093010.1-201ENST00000473625 1624 ntBASIC21.72■■□□□ 1.07
SNED1Q8TER0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNED1Q8TER0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNED1Q8TER0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.72■■□□□ 1.07
SNED1Q8TER0 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.72■■□□□ 1.07
SNED1Q8TER0 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SNED1Q8TER0 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.72■■□□□ 1.07
SNED1Q8TER0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.72■■□□□ 1.07
SNED1Q8TER0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNED1Q8TER0 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SNED1Q8TER0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SNED1Q8TER0 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNED1Q8TER0 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC21.72■■□□□ 1.07
SNED1Q8TER0 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SNED1Q8TER0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC21.72■■□□□ 1.07
SNED1Q8TER0 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC21.72■■□□□ 1.07
SNED1Q8TER0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC21.72■■□□□ 1.07
SNED1Q8TER0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC21.72■■□□□ 1.07
SNED1Q8TER0 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.71■■□□□ 1.07
SNED1Q8TER0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNED1Q8TER0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNED1Q8TER0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNED1Q8TER0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNED1Q8TER0 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
SNED1Q8TER0 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SNED1Q8TER0 CRYGEP-201ENST00000412192 528 ntBASIC21.71■■□□□ 1.07
SNED1Q8TER0 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC21.71■■□□□ 1.07
SNED1Q8TER0 PRSS29P-201ENST00000440800 595 ntBASIC21.71■■□□□ 1.07
SNED1Q8TER0 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC21.71■■□□□ 1.07
SNED1Q8TER0 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNED1Q8TER0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC21.71■■□□□ 1.07
SNED1Q8TER0 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC21.71■■□□□ 1.07
SNED1Q8TER0 RPS15P9-201ENST00000494093 319 ntBASIC21.71■■□□□ 1.07
SNED1Q8TER0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SNED1Q8TER0 PDPK2P-202ENST00000562415 1191 ntBASIC21.71■■□□□ 1.07
SNED1Q8TER0 SNHG9-202ENST00000564014 471 ntBASIC21.71■■□□□ 1.07
SNED1Q8TER0 AL031432.2-201ENST00000566714 459 ntBASIC21.71■■□□□ 1.07
SNED1Q8TER0 AL928711.1-201ENST00000570165 459 ntBASIC21.71■■□□□ 1.07
SNED1Q8TER0 AC010507.1-201ENST00000633895 436 ntBASIC21.71■■□□□ 1.07
SNED1Q8TER0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNED1Q8TER0 ANO7L1-203ENST00000602586 1720 ntBASIC21.7■■□□□ 1.07
SNED1Q8TER0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
SNED1Q8TER0 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.7■■□□□ 1.06
SNED1Q8TER0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNED1Q8TER0 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
SNED1Q8TER0 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.7■■□□□ 1.06
SNED1Q8TER0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SNED1Q8TER0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.7■■□□□ 1.06
SNED1Q8TER0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNED1Q8TER0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNED1Q8TER0 AL049757.1-201ENST00000616842 1596 ntBASIC21.7■■□□□ 1.06
SNED1Q8TER0 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNED1Q8TER0 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC21.7■■□□□ 1.06
SNED1Q8TER0 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC21.7■■□□□ 1.06
SNED1Q8TER0 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNED1Q8TER0 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC21.7■■□□□ 1.06
SNED1Q8TER0 AL645939.2-201ENST00000427340 991 ntBASIC21.7■■□□□ 1.06
SNED1Q8TER0 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNED1Q8TER0 PON3-205ENST00000451904 1053 ntTSL 3 BASIC21.7■■□□□ 1.06
SNED1Q8TER0 AP002472.1-201ENST00000577490 586 ntBASIC21.7■■□□□ 1.06
SNED1Q8TER0 MIR4751-201ENST00000578027 74 ntBASIC21.7■■□□□ 1.06
SNED1Q8TER0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC21.7■■□□□ 1.06
SNED1Q8TER0 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC21.7■■□□□ 1.06
SNED1Q8TER0 AL805961.1-202ENST00000641562 540 ntBASIC21.7■■□□□ 1.06
SNED1Q8TER0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNED1Q8TER0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
SNED1Q8TER0 NCF1C-201ENST00000438382 1427 ntBASIC21.7■■□□□ 1.06
SNED1Q8TER0 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNED1Q8TER0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SNED1Q8TER0 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNED1Q8TER0 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.69■■□□□ 1.06
SNED1Q8TER0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNED1Q8TER0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNED1Q8TER0 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNED1Q8TER0 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNED1Q8TER0 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNED1Q8TER0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNED1Q8TER0 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNED1Q8TER0 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SNED1Q8TER0 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNED1Q8TER0 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms