Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 SLC9A7P1-201ENST00000554295 3311 ntBASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 AL031595.1-201ENST00000623969 4709 ntBASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 GNAS-203ENST00000306120 1878 ntBASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
SPTSSBQ8NFR3 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 AC099063.4-201ENST00000641099 1602 ntBASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 CD72-202ENST00000378430 585 ntTSL 3 BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 MIR4508-201ENST00000584178 70 ntBASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 AC008175.2-201ENST00000612840 297 ntBASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 AR-203ENST00000396044 10221 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 CICP13-201ENST00000422015 2789 ntBASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 AC116050.2-201ENST00000612102 1779 ntBASIC9.86□□□□□ -0.83
SPTSSBQ8NFR3 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
SPTSSBQ8NFR3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
SPTSSBQ8NFR3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SPTSSBQ8NFR3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SPTSSBQ8NFR3 PID1-202ENST00000392054 2745 ntTSL 2 BASIC9.85□□□□□ -0.83
SPTSSBQ8NFR3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SPTSSBQ8NFR3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC9.85□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms