Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDH20Q8N6Y1 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDH20Q8N6Y1 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH20Q8N6Y1 CLEC4GP1-201ENST00000596555 870 ntBASIC18.35■□□□□ 0.53
PCDH20Q8N6Y1 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH20Q8N6Y1 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDH20Q8N6Y1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH20Q8N6Y1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH20Q8N6Y1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
PCDH20Q8N6Y1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDH20Q8N6Y1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH20Q8N6Y1 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH20Q8N6Y1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH20Q8N6Y1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDH20Q8N6Y1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDH20Q8N6Y1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 AC233702.3-201ENST00000578656 1387 ntBASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 AC246785.2-201ENST00000432512 513 ntBASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 KRT18P65-201ENST00000439811 1286 ntBASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 Z69720.1-201ENST00000601483 472 ntBASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH20Q8N6Y1 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDH20Q8N6Y1 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDH20Q8N6Y1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDH20Q8N6Y1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.33■□□□□ 0.53
PCDH20Q8N6Y1 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDH20Q8N6Y1 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.33■□□□□ 0.53
PCDH20Q8N6Y1 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDH20Q8N6Y1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDH20Q8N6Y1 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PCDH20Q8N6Y1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.33■□□□□ 0.53
PCDH20Q8N6Y1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.33■□□□□ 0.53
PCDH20Q8N6Y1 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
PCDH20Q8N6Y1 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDH20Q8N6Y1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDH20Q8N6Y1 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDH20Q8N6Y1 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PCDH20Q8N6Y1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH20Q8N6Y1 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH20Q8N6Y1 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDH20Q8N6Y1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.33■□□□□ 0.52
PCDH20Q8N6Y1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.33■□□□□ 0.52
PCDH20Q8N6Y1 AP000867.3-201ENST00000524675 377 ntBASIC18.33■□□□□ 0.52
PCDH20Q8N6Y1 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.33■□□□□ 0.52
PCDH20Q8N6Y1 AC012615.1-201ENST00000565797 1299 ntBASIC18.33■□□□□ 0.52
PCDH20Q8N6Y1 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH20Q8N6Y1 AC011840.4-201ENST00000578471 627 ntBASIC18.33■□□□□ 0.52
PCDH20Q8N6Y1 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDH20Q8N6Y1 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH20Q8N6Y1 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.33■□□□□ 0.52
PCDH20Q8N6Y1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH20Q8N6Y1 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH20Q8N6Y1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH20Q8N6Y1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDH20Q8N6Y1 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDH20Q8N6Y1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDH20Q8N6Y1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH20Q8N6Y1 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PCDH20Q8N6Y1 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH20Q8N6Y1 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms