Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD2Q8IV50 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC15.8■□□□□ 0.12
LYSMD2Q8IV50 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD2Q8IV50 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
LYSMD2Q8IV50 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC15.8■□□□□ 0.12
LYSMD2Q8IV50 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
LYSMD2Q8IV50 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD2Q8IV50 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD2Q8IV50 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.8■□□□□ 0.12
LYSMD2Q8IV50 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD2Q8IV50 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD2Q8IV50 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD2Q8IV50 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD2Q8IV50 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 AC004911.1-201ENST00000416316 871 ntBASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 AC105036.2-201ENST00000569468 176 ntBASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 CROCCP1-201ENST00000426910 5675 ntBASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LYSMD2Q8IV50 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD2Q8IV50 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LYSMD2Q8IV50 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD2Q8IV50 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD2Q8IV50 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD2Q8IV50 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD2Q8IV50 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD2Q8IV50 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD2Q8IV50 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD2Q8IV50 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD2Q8IV50 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD2Q8IV50 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD2Q8IV50 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD2Q8IV50 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD2Q8IV50 AF201337.1-201ENST00000520239 748 ntBASIC15.78■□□□□ 0.12
LYSMD2Q8IV50 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD2Q8IV50 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.78■□□□□ 0.12
LYSMD2Q8IV50 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD2Q8IV50 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.78■□□□□ 0.12
LYSMD2Q8IV50 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
LYSMD2Q8IV50 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD2Q8IV50 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD2Q8IV50 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD2Q8IV50 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD2Q8IV50 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
LYSMD2Q8IV50 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD2Q8IV50 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD2Q8IV50 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.78■□□□□ 0.12
LYSMD2Q8IV50 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD2Q8IV50 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LYSMD2Q8IV50 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD2Q8IV50 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LYSMD2Q8IV50 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.77■□□□□ 0.12
LYSMD2Q8IV50 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.77■□□□□ 0.12
LYSMD2Q8IV50 AC060834.1-201ENST00000443027 2032 ntBASIC15.77■□□□□ 0.12
LYSMD2Q8IV50 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LYSMD2Q8IV50 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
LYSMD2Q8IV50 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LYSMD2Q8IV50 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
LYSMD2Q8IV50 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LYSMD2Q8IV50 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.77■□□□□ 0.12
LYSMD2Q8IV50 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
LYSMD2Q8IV50 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.77■□□□□ 0.12
LYSMD2Q8IV50 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
LYSMD2Q8IV50 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
LYSMD2Q8IV50 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.77■□□□□ 0.12
LYSMD2Q8IV50 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.77■□□□□ 0.12
LYSMD2Q8IV50 AL160286.2-201ENST00000567150 934 ntBASIC15.77■□□□□ 0.12
LYSMD2Q8IV50 AL121829.2-201ENST00000620908 328 ntBASIC15.77■□□□□ 0.12
LYSMD2Q8IV50 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LYSMD2Q8IV50 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LYSMD2Q8IV50 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms