Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTL4Q6ZR62 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
RTL4Q6ZR62 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.87■□□□□ 0.29
RTL4Q6ZR62 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RTL4Q6ZR62 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
RTL4Q6ZR62 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.87■□□□□ 0.29
RTL4Q6ZR62 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTL4Q6ZR62 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTL4Q6ZR62 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTL4Q6ZR62 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.87■□□□□ 0.29
RTL4Q6ZR62 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.87■□□□□ 0.29
RTL4Q6ZR62 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTL4Q6ZR62 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTL4Q6ZR62 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
RTL4Q6ZR62 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTL4Q6ZR62 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RTL4Q6ZR62 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
RTL4Q6ZR62 NOC2LP2-201ENST00000407594 1944 ntBASIC16.86■□□□□ 0.29
RTL4Q6ZR62 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.86■□□□□ 0.29
RTL4Q6ZR62 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTL4Q6ZR62 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.86■□□□□ 0.29
RTL4Q6ZR62 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTL4Q6ZR62 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTL4Q6ZR62 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RTL4Q6ZR62 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.86■□□□□ 0.29
RTL4Q6ZR62 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTL4Q6ZR62 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTL4Q6ZR62 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RTL4Q6ZR62 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTL4Q6ZR62 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
RTL4Q6ZR62 KRT18P48-201ENST00000434763 852 ntBASIC16.86■□□□□ 0.29
RTL4Q6ZR62 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.86■□□□□ 0.29
RTL4Q6ZR62 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.86■□□□□ 0.29
RTL4Q6ZR62 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.86■□□□□ 0.29
RTL4Q6ZR62 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
RTL4Q6ZR62 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTL4Q6ZR62 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTL4Q6ZR62 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTL4Q6ZR62 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTL4Q6ZR62 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.86■□□□□ 0.29
RTL4Q6ZR62 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTL4Q6ZR62 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RTL4Q6ZR62 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTL4Q6ZR62 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.86■□□□□ 0.29
RTL4Q6ZR62 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RTL4Q6ZR62 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.86■□□□□ 0.29
RTL4Q6ZR62 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTL4Q6ZR62 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.85■□□□□ 0.29
RTL4Q6ZR62 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
RTL4Q6ZR62 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RTL4Q6ZR62 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTL4Q6ZR62 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.85■□□□□ 0.29
RTL4Q6ZR62 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTL4Q6ZR62 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
RTL4Q6ZR62 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTL4Q6ZR62 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.85■□□□□ 0.29
RTL4Q6ZR62 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.85■□□□□ 0.29
RTL4Q6ZR62 BX276092.5-203ENST00000456199 560 ntBASIC16.85■□□□□ 0.29
RTL4Q6ZR62 AP003733.1-201ENST00000491725 852 ntBASIC16.85■□□□□ 0.29
RTL4Q6ZR62 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.85■□□□□ 0.29
RTL4Q6ZR62 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.85■□□□□ 0.29
RTL4Q6ZR62 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.85■□□□□ 0.29
RTL4Q6ZR62 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.85■□□□□ 0.29
RTL4Q6ZR62 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.85■□□□□ 0.29
RTL4Q6ZR62 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.85■□□□□ 0.29
RTL4Q6ZR62 AC024563.2-201ENST00000603282 481 ntBASIC16.85■□□□□ 0.29
RTL4Q6ZR62 AL121672.3-201ENST00000608644 468 ntBASIC16.85■□□□□ 0.29
RTL4Q6ZR62 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTL4Q6ZR62 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RTL4Q6ZR62 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTL4Q6ZR62 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTL4Q6ZR62 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTL4Q6ZR62 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTL4Q6ZR62 AC009102.3-201ENST00000623118 1491 ntBASIC16.85■□□□□ 0.29
RTL4Q6ZR62 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.85■□□□□ 0.29
RTL4Q6ZR62 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTL4Q6ZR62 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RTL4Q6ZR62 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RTL4Q6ZR62 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTL4Q6ZR62 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RTL4Q6ZR62 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RTL4Q6ZR62 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTL4Q6ZR62 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTL4Q6ZR62 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTL4Q6ZR62 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.84■□□□□ 0.29
RTL4Q6ZR62 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RTL4Q6ZR62 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.84■□□□□ 0.29
RTL4Q6ZR62 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.84■□□□□ 0.29
RTL4Q6ZR62 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.84■□□□□ 0.29
RTL4Q6ZR62 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.84■□□□□ 0.29
RTL4Q6ZR62 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.84■□□□□ 0.29
RTL4Q6ZR62 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTL4Q6ZR62 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTL4Q6ZR62 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RTL4Q6ZR62 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.84■□□□□ 0.29
RTL4Q6ZR62 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RTL4Q6ZR62 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTL4Q6ZR62 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTL4Q6ZR62 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.84■□□□□ 0.29
RTL4Q6ZR62 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms