Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
DCLRE1AQ6PJP8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.66
DCLRE1AQ6PJP8 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
DCLRE1AQ6PJP8 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
DCLRE1AQ6PJP8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
DCLRE1AQ6PJP8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DCLRE1AQ6PJP8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
DCLRE1AQ6PJP8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
DCLRE1AQ6PJP8 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
DCLRE1AQ6PJP8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
DCLRE1AQ6PJP8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DCLRE1AQ6PJP8 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.14■□□□□ 0.65
DCLRE1AQ6PJP8 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.14■□□□□ 0.65
DCLRE1AQ6PJP8 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.14■□□□□ 0.65
DCLRE1AQ6PJP8 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.14■□□□□ 0.65
DCLRE1AQ6PJP8 RNPS1P1-201ENST00000507437 918 ntBASIC19.14■□□□□ 0.65
DCLRE1AQ6PJP8 RNA5SP419-201ENST00000515908 135 ntBASIC19.14■□□□□ 0.65
DCLRE1AQ6PJP8 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.14■□□□□ 0.65
DCLRE1AQ6PJP8 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.14■□□□□ 0.65
DCLRE1AQ6PJP8 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.14■□□□□ 0.65
DCLRE1AQ6PJP8 AP001005.1-201ENST00000571755 1248 ntBASIC19.14■□□□□ 0.65
DCLRE1AQ6PJP8 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.14■□□□□ 0.65
DCLRE1AQ6PJP8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.14■□□□□ 0.65
DCLRE1AQ6PJP8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
DCLRE1AQ6PJP8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DCLRE1AQ6PJP8 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.14■□□□□ 0.65
DCLRE1AQ6PJP8 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
DCLRE1AQ6PJP8 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.14■□□□□ 0.65
DCLRE1AQ6PJP8 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
DCLRE1AQ6PJP8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
DCLRE1AQ6PJP8 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
DCLRE1AQ6PJP8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 AL671883.3-201ENST00000603274 991 ntBASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 AC139530.3-201ENST00000620344 690 ntBASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
DCLRE1AQ6PJP8 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DCLRE1AQ6PJP8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DCLRE1AQ6PJP8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.12■□□□□ 0.65
DCLRE1AQ6PJP8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.12■□□□□ 0.65
DCLRE1AQ6PJP8 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
DCLRE1AQ6PJP8 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.12■□□□□ 0.65
DCLRE1AQ6PJP8 AL096828.2-201ENST00000567259 1965 ntBASIC19.12■□□□□ 0.65
DCLRE1AQ6PJP8 AC093677.2-201ENST00000600169 1863 ntBASIC19.12■□□□□ 0.65
DCLRE1AQ6PJP8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
DCLRE1AQ6PJP8 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
DCLRE1AQ6PJP8 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DCLRE1AQ6PJP8 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.12■□□□□ 0.65
DCLRE1AQ6PJP8 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.12■□□□□ 0.65
DCLRE1AQ6PJP8 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
DCLRE1AQ6PJP8 AL031284.1-201ENST00000419297 478 ntBASIC19.12■□□□□ 0.65
DCLRE1AQ6PJP8 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.12■□□□□ 0.65
DCLRE1AQ6PJP8 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.12■□□□□ 0.65
DCLRE1AQ6PJP8 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.12■□□□□ 0.65
DCLRE1AQ6PJP8 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.12■□□□□ 0.65
DCLRE1AQ6PJP8 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.12■□□□□ 0.65
DCLRE1AQ6PJP8 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
DCLRE1AQ6PJP8 AC148477.8-201ENST00000624298 468 ntBASIC19.12■□□□□ 0.65
DCLRE1AQ6PJP8 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
DCLRE1AQ6PJP8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.12■□□□□ 0.65
DCLRE1AQ6PJP8 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.12■□□□□ 0.65
DCLRE1AQ6PJP8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
DCLRE1AQ6PJP8 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
DCLRE1AQ6PJP8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DCLRE1AQ6PJP8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DCLRE1AQ6PJP8 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
DCLRE1AQ6PJP8 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms