Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.97■□□□□ 0.79
SWSAP1Q6NVH7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SWSAP1Q6NVH7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.97■□□□□ 0.79
SWSAP1Q6NVH7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SWSAP1Q6NVH7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.97■□□□□ 0.79
SWSAP1Q6NVH7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.97■□□□□ 0.79
SWSAP1Q6NVH7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SWSAP1Q6NVH7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.97■□□□□ 0.79
SWSAP1Q6NVH7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.97■□□□□ 0.79
SWSAP1Q6NVH7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.97■□□□□ 0.79
SWSAP1Q6NVH7 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.97■□□□□ 0.79
SWSAP1Q6NVH7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.97■□□□□ 0.79
SWSAP1Q6NVH7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SWSAP1Q6NVH7 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SWSAP1Q6NVH7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SWSAP1Q6NVH7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SWSAP1Q6NVH7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SWSAP1Q6NVH7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.97■□□□□ 0.79
SWSAP1Q6NVH7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SWSAP1Q6NVH7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SWSAP1Q6NVH7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.96■□□□□ 0.79
SWSAP1Q6NVH7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SWSAP1Q6NVH7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SWSAP1Q6NVH7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.96■□□□□ 0.79
SWSAP1Q6NVH7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
SWSAP1Q6NVH7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.96■□□□□ 0.79
SWSAP1Q6NVH7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SWSAP1Q6NVH7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SWSAP1Q6NVH7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SWSAP1Q6NVH7 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
SWSAP1Q6NVH7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SWSAP1Q6NVH7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SWSAP1Q6NVH7 AC007967.3-201ENST00000434308 558 ntBASIC19.96■□□□□ 0.79
SWSAP1Q6NVH7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SWSAP1Q6NVH7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.96■□□□□ 0.79
SWSAP1Q6NVH7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.96■□□□□ 0.79
SWSAP1Q6NVH7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.96■□□□□ 0.79
SWSAP1Q6NVH7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SWSAP1Q6NVH7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SWSAP1Q6NVH7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
SWSAP1Q6NVH7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SWSAP1Q6NVH7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SWSAP1Q6NVH7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SWSAP1Q6NVH7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SWSAP1Q6NVH7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.96■□□□□ 0.79
SWSAP1Q6NVH7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SWSAP1Q6NVH7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SWSAP1Q6NVH7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.95■□□□□ 0.79
SWSAP1Q6NVH7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.95■□□□□ 0.78
SWSAP1Q6NVH7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SWSAP1Q6NVH7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.95■□□□□ 0.78
SWSAP1Q6NVH7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SWSAP1Q6NVH7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.95■□□□□ 0.78
SWSAP1Q6NVH7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SWSAP1Q6NVH7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.95■□□□□ 0.78
SWSAP1Q6NVH7 AP002469.2-201ENST00000531724 424 ntBASIC19.95■□□□□ 0.78
SWSAP1Q6NVH7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
SWSAP1Q6NVH7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.95■□□□□ 0.78
SWSAP1Q6NVH7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.95■□□□□ 0.78
SWSAP1Q6NVH7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.95■□□□□ 0.78
SWSAP1Q6NVH7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.95■□□□□ 0.78
SWSAP1Q6NVH7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.95■□□□□ 0.78
SWSAP1Q6NVH7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.95■□□□□ 0.78
SWSAP1Q6NVH7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.95■□□□□ 0.78
SWSAP1Q6NVH7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SWSAP1Q6NVH7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
SWSAP1Q6NVH7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.95■□□□□ 0.78
SWSAP1Q6NVH7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SWSAP1Q6NVH7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.95■□□□□ 0.78
SWSAP1Q6NVH7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SWSAP1Q6NVH7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SWSAP1Q6NVH7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SWSAP1Q6NVH7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SWSAP1Q6NVH7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SWSAP1Q6NVH7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SWSAP1Q6NVH7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SWSAP1Q6NVH7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SWSAP1Q6NVH7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.94■□□□□ 0.78
SWSAP1Q6NVH7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
SWSAP1Q6NVH7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SWSAP1Q6NVH7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.94■□□□□ 0.78
SWSAP1Q6NVH7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SWSAP1Q6NVH7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.94■□□□□ 0.78
SWSAP1Q6NVH7 AP000997.3-201ENST00000623333 2250 ntBASIC19.94■□□□□ 0.78
SWSAP1Q6NVH7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SWSAP1Q6NVH7 AC096633.1-201ENST00000422446 749 ntBASIC19.94■□□□□ 0.78
SWSAP1Q6NVH7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.94■□□□□ 0.78
SWSAP1Q6NVH7 AP001269.4-201ENST00000609611 512 ntBASIC19.94■□□□□ 0.78
SWSAP1Q6NVH7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.94■□□□□ 0.78
SWSAP1Q6NVH7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SWSAP1Q6NVH7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SWSAP1Q6NVH7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.94■□□□□ 0.78
SWSAP1Q6NVH7 AC010460.3-201ENST00000511359 1579 ntBASIC19.94■□□□□ 0.78
SWSAP1Q6NVH7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SWSAP1Q6NVH7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SWSAP1Q6NVH7 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
SWSAP1Q6NVH7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SWSAP1Q6NVH7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SWSAP1Q6NVH7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SWSAP1Q6NVH7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms