Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 AC097488.1-201ENST00000507834 756 ntBASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 KRT18P55-202ENST00000578578 1546 ntBASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCN1P1Q5VSP4 HOXB1-202ENST00000577092 1414 ntBASIC16.28■□□□□ 0.2
LCN1P1Q5VSP4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.28■□□□□ 0.2
LCN1P1Q5VSP4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.28■□□□□ 0.2
LCN1P1Q5VSP4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
LCN1P1Q5VSP4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCN1P1Q5VSP4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCN1P1Q5VSP4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LCN1P1Q5VSP4 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCN1P1Q5VSP4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCN1P1Q5VSP4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCN1P1Q5VSP4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LCN1P1Q5VSP4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LCN1P1Q5VSP4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LCN1P1Q5VSP4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
LCN1P1Q5VSP4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
LCN1P1Q5VSP4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LCN1P1Q5VSP4 KRT18P23-201ENST00000435622 1283 ntBASIC16.28■□□□□ 0.2
LCN1P1Q5VSP4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.28■□□□□ 0.2
LCN1P1Q5VSP4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LCN1P1Q5VSP4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.28■□□□□ 0.2
LCN1P1Q5VSP4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.28■□□□□ 0.2
LCN1P1Q5VSP4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.28■□□□□ 0.2
LCN1P1Q5VSP4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.28■□□□□ 0.2
LCN1P1Q5VSP4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCN1P1Q5VSP4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCN1P1Q5VSP4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.28■□□□□ 0.2
LCN1P1Q5VSP4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LCN1P1Q5VSP4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.27■□□□□ 0.2
LCN1P1Q5VSP4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LCN1P1Q5VSP4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.27■□□□□ 0.2
LCN1P1Q5VSP4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LCN1P1Q5VSP4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LCN1P1Q5VSP4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.27■□□□□ 0.2
LCN1P1Q5VSP4 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LCN1P1Q5VSP4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LCN1P1Q5VSP4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.27■□□□□ 0.2
LCN1P1Q5VSP4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LCN1P1Q5VSP4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LCN1P1Q5VSP4 AC006116.8-202ENST00000587620 1550 ntBASIC16.27■□□□□ 0.2
LCN1P1Q5VSP4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LCN1P1Q5VSP4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.27■□□□□ 0.2
LCN1P1Q5VSP4 AC116562.2-201ENST00000507042 360 ntBASIC16.27■□□□□ 0.2
LCN1P1Q5VSP4 NUDT16P1-203ENST00000513809 620 ntBASIC16.27■□□□□ 0.2
LCN1P1Q5VSP4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.27■□□□□ 0.2
LCN1P1Q5VSP4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
LCN1P1Q5VSP4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.27■□□□□ 0.2
LCN1P1Q5VSP4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.27■□□□□ 0.2
LCN1P1Q5VSP4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.27■□□□□ 0.2
LCN1P1Q5VSP4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.27■□□□□ 0.2
LCN1P1Q5VSP4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.27■□□□□ 0.2
LCN1P1Q5VSP4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LCN1P1Q5VSP4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.27■□□□□ 0.2
LCN1P1Q5VSP4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LCN1P1Q5VSP4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LCN1P1Q5VSP4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LCN1P1Q5VSP4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LCN1P1Q5VSP4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.27■□□□□ 0.19
LCN1P1Q5VSP4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LCN1P1Q5VSP4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LCN1P1Q5VSP4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LCN1P1Q5VSP4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LCN1P1Q5VSP4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
LCN1P1Q5VSP4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LCN1P1Q5VSP4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LCN1P1Q5VSP4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LCN1P1Q5VSP4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms