Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 AC141586.5-201ENST00000624546 2050 ntBASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ATPAF1Q5TC12 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 SLC25A3P1-201ENST00000443844 931 ntBASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
ATPAF1Q5TC12 AC008556.1-201ENST00000610908 2040 ntBASIC15.61■□□□□ 0.09
ATPAF1Q5TC12 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATPAF1Q5TC12 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATPAF1Q5TC12 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ATPAF1Q5TC12 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.61■□□□□ 0.09
ATPAF1Q5TC12 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.61■□□□□ 0.09
ATPAF1Q5TC12 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATPAF1Q5TC12 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ATPAF1Q5TC12 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ATPAF1Q5TC12 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATPAF1Q5TC12 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATPAF1Q5TC12 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.61■□□□□ 0.09
ATPAF1Q5TC12 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATPAF1Q5TC12 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATPAF1Q5TC12 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATPAF1Q5TC12 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ATPAF1Q5TC12 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
ATPAF1Q5TC12 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.61■□□□□ 0.09
ATPAF1Q5TC12 AC005363.2-201ENST00000618631 242 ntBASIC15.61■□□□□ 0.09
ATPAF1Q5TC12 CR769767.2-201ENST00000622735 460 ntBASIC15.61■□□□□ 0.09
ATPAF1Q5TC12 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ATPAF1Q5TC12 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
ATPAF1Q5TC12 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.61■□□□□ 0.09
ATPAF1Q5TC12 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ATPAF1Q5TC12 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
ATPAF1Q5TC12 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ATPAF1Q5TC12 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
ATPAF1Q5TC12 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.61■□□□□ 0.09
ATPAF1Q5TC12 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.61■□□□□ 0.09
ATPAF1Q5TC12 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ATPAF1Q5TC12 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 KRT8P7-201ENST00000533003 1432 ntBASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 AD000864.1-201ENST00000624076 2295 ntBASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 FLJ13224-201ENST00000313737 1514 ntBASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 AL357033.4-201ENST00000617703 1807 ntBASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 KRT18P41-201ENST00000518924 1277 ntBASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms