Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 SPCS2P4-201ENST00000436160 681 ntBASIC9.72□□□□□ -0.85
UBR4Q5T4S7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 AC027369.6-201ENST00000525520 931 ntBASIC9.72□□□□□ -0.85
UBR4Q5T4S7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 AF106564.1-201ENST00000607058 2553 ntBASIC9.72□□□□□ -0.85
UBR4Q5T4S7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 AC007967.3-201ENST00000434308 558 ntBASIC9.72□□□□□ -0.85
UBR4Q5T4S7 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
UBR4Q5T4S7 DFFBP1-201ENST00000433250 979 ntBASIC9.71□□□□□ -0.85
UBR4Q5T4S7 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
UBR4Q5T4S7 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC9.71□□□□□ -0.85
UBR4Q5T4S7 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
UBR4Q5T4S7 Z98882.1-201ENST00000622160 2253 ntBASIC9.71□□□□□ -0.85
UBR4Q5T4S7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
UBR4Q5T4S7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
UBR4Q5T4S7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
UBR4Q5T4S7 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
UBR4Q5T4S7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC9.71□□□□□ -0.85
UBR4Q5T4S7 FAM185BP-201ENST00000443595 716 ntBASIC9.71□□□□□ -0.85
UBR4Q5T4S7 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC9.71□□□□□ -0.85
UBR4Q5T4S7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC9.71□□□□□ -0.85
UBR4Q5T4S7 HLA-C-210ENST00000640219 976 ntBASIC9.71□□□□□ -0.85
UBR4Q5T4S7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
UBR4Q5T4S7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
UBR4Q5T4S7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC9.71□□□□□ -0.85
UBR4Q5T4S7 AL391422.3-201ENST00000603791 2761 ntBASIC9.71□□□□□ -0.85
UBR4Q5T4S7 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
UBR4Q5T4S7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
UBR4Q5T4S7 PPOX-204ENST00000462866 473 ntTSL 5 BASIC9.71□□□□□ -0.86
UBR4Q5T4S7 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC9.71□□□□□ -0.86
UBR4Q5T4S7 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
UBR4Q5T4S7 TECR-220ENST00000600083 1204 ntTSL 2 BASIC9.71□□□□□ -0.86
UBR4Q5T4S7 AC008667.4-201ENST00000607370 168 ntBASIC9.71□□□□□ -0.86
UBR4Q5T4S7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC9.71□□□□□ -0.86
UBR4Q5T4S7 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC9.71□□□□□ -0.86
UBR4Q5T4S7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
UBR4Q5T4S7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
UBR4Q5T4S7 AC006116.8-202ENST00000587620 1550 ntBASIC9.71□□□□□ -0.86
UBR4Q5T4S7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
UBR4Q5T4S7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
UBR4Q5T4S7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC9.71□□□□□ -0.86
UBR4Q5T4S7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC9.71□□□□□ -0.86
UBR4Q5T4S7 AC105129.2-201ENST00000559536 390 ntBASIC9.71□□□□□ -0.86
UBR4Q5T4S7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC9.71□□□□□ -0.86
UBR4Q5T4S7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
UBR4Q5T4S7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
UBR4Q5T4S7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
UBR4Q5T4S7 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
UBR4Q5T4S7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
UBR4Q5T4S7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
UBR4Q5T4S7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
UBR4Q5T4S7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
UBR4Q5T4S7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms