Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VARS2Q5ST30 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VARS2Q5ST30 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VARS2Q5ST30 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VARS2Q5ST30 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
VARS2Q5ST30 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
VARS2Q5ST30 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.98■□□□□ 0.63
VARS2Q5ST30 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
VARS2Q5ST30 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
VARS2Q5ST30 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VARS2Q5ST30 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
VARS2Q5ST30 IL9RP2-201ENST00000423948 1312 ntBASIC18.98■□□□□ 0.63
VARS2Q5ST30 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VARS2Q5ST30 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.98■□□□□ 0.63
VARS2Q5ST30 AC010460.3-201ENST00000511359 1579 ntBASIC18.98■□□□□ 0.63
VARS2Q5ST30 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VARS2Q5ST30 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VARS2Q5ST30 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VARS2Q5ST30 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VARS2Q5ST30 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VARS2Q5ST30 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VARS2Q5ST30 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VARS2Q5ST30 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
VARS2Q5ST30 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VARS2Q5ST30 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VARS2Q5ST30 TNXA-203ENST00000507684 2038 ntBASIC18.97■□□□□ 0.63
VARS2Q5ST30 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VARS2Q5ST30 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VARS2Q5ST30 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VARS2Q5ST30 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VARS2Q5ST30 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.97■□□□□ 0.63
VARS2Q5ST30 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VARS2Q5ST30 PMS2P1-201ENST00000431037 1228 ntBASIC18.97■□□□□ 0.63
VARS2Q5ST30 HNRNPDP1-201ENST00000439535 754 ntBASIC18.97■□□□□ 0.63
VARS2Q5ST30 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.97■□□□□ 0.63
VARS2Q5ST30 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.97■□□□□ 0.63
VARS2Q5ST30 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VARS2Q5ST30 AL049840.3-201ENST00000602669 611 ntBASIC18.97■□□□□ 0.63
VARS2Q5ST30 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.97■□□□□ 0.63
VARS2Q5ST30 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.97■□□□□ 0.63
VARS2Q5ST30 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VARS2Q5ST30 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
VARS2Q5ST30 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VARS2Q5ST30 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VARS2Q5ST30 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VARS2Q5ST30 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VARS2Q5ST30 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VARS2Q5ST30 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
VARS2Q5ST30 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
VARS2Q5ST30 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VARS2Q5ST30 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
VARS2Q5ST30 AC093677.2-201ENST00000600169 1863 ntBASIC18.97■□□□□ 0.63
VARS2Q5ST30 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VARS2Q5ST30 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VARS2Q5ST30 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.96■□□□□ 0.63
VARS2Q5ST30 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
VARS2Q5ST30 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.96■□□□□ 0.63
VARS2Q5ST30 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
VARS2Q5ST30 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
VARS2Q5ST30 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VARS2Q5ST30 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VARS2Q5ST30 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VARS2Q5ST30 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.96■□□□□ 0.63
VARS2Q5ST30 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VARS2Q5ST30 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VARS2Q5ST30 AC093909.1-201ENST00000504731 1122 ntBASIC18.96■□□□□ 0.63
VARS2Q5ST30 AC021087.4-201ENST00000563761 564 ntBASIC18.96■□□□□ 0.63
VARS2Q5ST30 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
VARS2Q5ST30 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.96■□□□□ 0.63
VARS2Q5ST30 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.96■□□□□ 0.63
VARS2Q5ST30 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
VARS2Q5ST30 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC18.96■□□□□ 0.63
VARS2Q5ST30 MIR7706-201ENST00000613747 67 ntBASIC18.96■□□□□ 0.63
VARS2Q5ST30 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.96■□□□□ 0.63
VARS2Q5ST30 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.96■□□□□ 0.63
VARS2Q5ST30 FAM215A-202ENST00000632077 792 ntBASIC18.96■□□□□ 0.63
VARS2Q5ST30 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VARS2Q5ST30 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VARS2Q5ST30 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.96■□□□□ 0.63
VARS2Q5ST30 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.96■□□□□ 0.63
VARS2Q5ST30 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VARS2Q5ST30 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VARS2Q5ST30 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VARS2Q5ST30 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VARS2Q5ST30 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VARS2Q5ST30 AL356309.3-201ENST00000624132 1934 ntBASIC18.96■□□□□ 0.63
VARS2Q5ST30 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
VARS2Q5ST30 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VARS2Q5ST30 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VARS2Q5ST30 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VARS2Q5ST30 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.95■□□□□ 0.62
VARS2Q5ST30 AC243591.1-201ENST00000452967 1364 ntBASIC18.95■□□□□ 0.62
VARS2Q5ST30 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VARS2Q5ST30 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VARS2Q5ST30 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.95■□□□□ 0.62
VARS2Q5ST30 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
VARS2Q5ST30 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.95■□□□□ 0.62
VARS2Q5ST30 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
VARS2Q5ST30 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VARS2Q5ST30 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms