Protein–RNA interactions for Protein: Q12805

EFEMP1, EGF-containing fibulin-like extracellular matrix protein 1, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1Q12805 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
EFEMP1Q12805 AC022898.2-201ENST00000616822 1312 ntBASIC18.66■□□□□ 0.58
EFEMP1Q12805 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFEMP1Q12805 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFEMP1Q12805 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
EFEMP1Q12805 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
EFEMP1Q12805 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFEMP1Q12805 AC125634.1-201ENST00000438758 1403 ntBASIC18.66■□□□□ 0.58
EFEMP1Q12805 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFEMP1Q12805 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
EFEMP1Q12805 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
EFEMP1Q12805 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.65■□□□□ 0.58
EFEMP1Q12805 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFEMP1Q12805 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.65■□□□□ 0.58
EFEMP1Q12805 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.65■□□□□ 0.58
EFEMP1Q12805 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.65■□□□□ 0.58
EFEMP1Q12805 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.65■□□□□ 0.58
EFEMP1Q12805 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFEMP1Q12805 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFEMP1Q12805 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EFEMP1Q12805 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
EFEMP1Q12805 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EFEMP1Q12805 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.65■□□□□ 0.58
EFEMP1Q12805 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFEMP1Q12805 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFEMP1Q12805 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFEMP1Q12805 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.65■□□□□ 0.58
EFEMP1Q12805 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFEMP1Q12805 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EFEMP1Q12805 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFEMP1Q12805 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFEMP1Q12805 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
EFEMP1Q12805 POM121L3P-201ENST00000419331 1163 ntBASIC18.65■□□□□ 0.58
EFEMP1Q12805 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.65■□□□□ 0.58
EFEMP1Q12805 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.65■□□□□ 0.58
EFEMP1Q12805 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.65■□□□□ 0.58
EFEMP1Q12805 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.65■□□□□ 0.58
EFEMP1Q12805 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.65■□□□□ 0.58
EFEMP1Q12805 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.65■□□□□ 0.58
EFEMP1Q12805 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.65■□□□□ 0.58
EFEMP1Q12805 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EFEMP1Q12805 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EFEMP1Q12805 RN7SL510P-201ENST00000581311 263 ntBASIC18.65■□□□□ 0.58
EFEMP1Q12805 LINC01711-201ENST00000598340 967 ntBASIC18.65■□□□□ 0.58
EFEMP1Q12805 AL138831.2-201ENST00000606564 490 ntBASIC18.65■□□□□ 0.58
EFEMP1Q12805 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EFEMP1Q12805 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFEMP1Q12805 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFEMP1Q12805 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFEMP1Q12805 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFEMP1Q12805 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFEMP1Q12805 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
EFEMP1Q12805 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFEMP1Q12805 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFEMP1Q12805 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
EFEMP1Q12805 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
EFEMP1Q12805 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
EFEMP1Q12805 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
EFEMP1Q12805 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.64■□□□□ 0.57
EFEMP1Q12805 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFEMP1Q12805 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.64■□□□□ 0.57
EFEMP1Q12805 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.64■□□□□ 0.57
EFEMP1Q12805 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EFEMP1Q12805 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFEMP1Q12805 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFEMP1Q12805 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFEMP1Q12805 KRT16P4-201ENST00000453883 522 ntBASIC18.64■□□□□ 0.57
EFEMP1Q12805 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.64■□□□□ 0.57
EFEMP1Q12805 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.64■□□□□ 0.57
EFEMP1Q12805 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFEMP1Q12805 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.64■□□□□ 0.57
EFEMP1Q12805 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.64■□□□□ 0.57
EFEMP1Q12805 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EFEMP1Q12805 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.64■□□□□ 0.57
EFEMP1Q12805 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.64■□□□□ 0.57
EFEMP1Q12805 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.64■□□□□ 0.57
EFEMP1Q12805 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFEMP1Q12805 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.64■□□□□ 0.57
EFEMP1Q12805 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
EFEMP1Q12805 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFEMP1Q12805 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFEMP1Q12805 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.64■□□□□ 0.57
EFEMP1Q12805 TP73-AS1-210ENST00000637775 1455 ntBASIC18.64■□□□□ 0.57
EFEMP1Q12805 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFEMP1Q12805 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFEMP1Q12805 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.63■□□□□ 0.57
EFEMP1Q12805 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFEMP1Q12805 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFEMP1Q12805 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFEMP1Q12805 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFEMP1Q12805 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
EFEMP1Q12805 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
EFEMP1Q12805 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.63■□□□□ 0.57
EFEMP1Q12805 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EFEMP1Q12805 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFEMP1Q12805 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFEMP1Q12805 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EFEMP1Q12805 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.63■□□□□ 0.57
EFEMP1Q12805 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.63■□□□□ 0.57
EFEMP1Q12805 RCN1P2-201ENST00000398357 915 ntBASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms