Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
SEC61A1P61619 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.76■□□□□ 0.11
SEC61A1P61619 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
SEC61A1P61619 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SEC61A1P61619 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SEC61A1P61619 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SEC61A1P61619 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SEC61A1P61619 AC046158.3-201ENST00000624947 2558 ntBASIC15.76■□□□□ 0.11
SEC61A1P61619 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SEC61A1P61619 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SEC61A1P61619 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SEC61A1P61619 SLC25A6P5-201ENST00000435663 894 ntBASIC15.76■□□□□ 0.11
SEC61A1P61619 DUX4L26-201ENST00000489078 1255 ntBASIC15.76■□□□□ 0.11
SEC61A1P61619 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SEC61A1P61619 KRT18P35-201ENST00000510488 1269 ntBASIC15.76■□□□□ 0.11
SEC61A1P61619 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.76■□□□□ 0.11
SEC61A1P61619 MIR4674-201ENST00000582457 87 ntBASIC15.76■□□□□ 0.11
SEC61A1P61619 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.76■□□□□ 0.11
SEC61A1P61619 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.76■□□□□ 0.11
SEC61A1P61619 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
SEC61A1P61619 AL138966.2-201ENST00000621997 464 ntBASIC15.76■□□□□ 0.11
SEC61A1P61619 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SEC61A1P61619 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.76■□□□□ 0.11
SEC61A1P61619 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SEC61A1P61619 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SEC61A1P61619 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
SEC61A1P61619 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SEC61A1P61619 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SEC61A1P61619 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SEC61A1P61619 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SEC61A1P61619 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SEC61A1P61619 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SEC61A1P61619 KRT8P45-201ENST00000414328 1447 ntBASIC15.76■□□□□ 0.11
SEC61A1P61619 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SEC61A1P61619 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SEC61A1P61619 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
SEC61A1P61619 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.76■□□□□ 0.11
SEC61A1P61619 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
SEC61A1P61619 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SEC61A1P61619 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SEC61A1P61619 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SEC61A1P61619 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SEC61A1P61619 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SEC61A1P61619 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SEC61A1P61619 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SEC61A1P61619 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SEC61A1P61619 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SEC61A1P61619 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SEC61A1P61619 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SEC61A1P61619 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
SEC61A1P61619 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SEC61A1P61619 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.75■□□□□ 0.11
SEC61A1P61619 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SEC61A1P61619 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SEC61A1P61619 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SEC61A1P61619 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.75■□□□□ 0.11
SEC61A1P61619 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SEC61A1P61619 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SEC61A1P61619 AC117947.1-201ENST00000427448 529 ntBASIC15.75■□□□□ 0.11
SEC61A1P61619 AC139887.4-201ENST00000607877 719 ntBASIC15.75■□□□□ 0.11
SEC61A1P61619 AC008622.2-201ENST00000617006 1229 ntBASIC15.75■□□□□ 0.11
SEC61A1P61619 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
SEC61A1P61619 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.75■□□□□ 0.11
SEC61A1P61619 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
SEC61A1P61619 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
SEC61A1P61619 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SEC61A1P61619 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SEC61A1P61619 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SEC61A1P61619 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.74■□□□□ 0.11
SEC61A1P61619 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.74■□□□□ 0.11
SEC61A1P61619 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
SEC61A1P61619 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
SEC61A1P61619 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.74■□□□□ 0.11
SEC61A1P61619 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SEC61A1P61619 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
SEC61A1P61619 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SEC61A1P61619 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC15.74■□□□□ 0.11
SEC61A1P61619 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SEC61A1P61619 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SEC61A1P61619 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
SEC61A1P61619 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.74■□□□□ 0.11
SEC61A1P61619 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.74■□□□□ 0.11
SEC61A1P61619 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SEC61A1P61619 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
SEC61A1P61619 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
SEC61A1P61619 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SEC61A1P61619 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
SEC61A1P61619 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.74■□□□□ 0.11
SEC61A1P61619 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.74■□□□□ 0.11
SEC61A1P61619 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.74■□□□□ 0.11
SEC61A1P61619 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.74■□□□□ 0.11
SEC61A1P61619 WWOX-216ENST00000569818 525 ntBASIC15.74■□□□□ 0.11
SEC61A1P61619 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.74■□□□□ 0.11
SEC61A1P61619 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SEC61A1P61619 AC141257.4-201ENST00000634557 245 ntBASIC15.74■□□□□ 0.11
SEC61A1P61619 AC136944.6-201ENST00000634818 245 ntBASIC15.74■□□□□ 0.11
SEC61A1P61619 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
SEC61A1P61619 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SEC61A1P61619 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.74■□□□□ 0.11
SEC61A1P61619 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms