Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN6P56747 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN6P56747 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN6P56747 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN6P56747 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN6P56747 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN6P56747 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN6P56747 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN6P56747 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.21■□□□□ 0.35
CLDN6P56747 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN6P56747 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN6P56747 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN6P56747 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.21■□□□□ 0.35
CLDN6P56747 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN6P56747 AC083906.6-201ENST00000641366 219 ntBASIC17.21■□□□□ 0.35
CLDN6P56747 AC079781.4-201ENST00000641908 219 ntBASIC17.21■□□□□ 0.35
CLDN6P56747 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN6P56747 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN6P56747 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CLDN6P56747 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN6P56747 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN6P56747 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN6P56747 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CLDN6P56747 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CLDN6P56747 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.2■□□□□ 0.34
CLDN6P56747 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN6P56747 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN6P56747 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN6P56747 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN6P56747 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.2■□□□□ 0.34
CLDN6P56747 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN6P56747 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN6P56747 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CLDN6P56747 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN6P56747 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN6P56747 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CLDN6P56747 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN6P56747 AC004832.2-201ENST00000426397 482 ntBASIC17.2■□□□□ 0.34
CLDN6P56747 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN6P56747 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.2■□□□□ 0.34
CLDN6P56747 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.2■□□□□ 0.34
CLDN6P56747 AC002347.1-201ENST00000569543 541 ntBASIC17.2■□□□□ 0.34
CLDN6P56747 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.2■□□□□ 0.34
CLDN6P56747 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.2■□□□□ 0.34
CLDN6P56747 AC008687.5-201ENST00000593746 558 ntBASIC17.2■□□□□ 0.34
CLDN6P56747 AC064836.3-201ENST00000607928 673 ntBASIC17.2■□□□□ 0.34
CLDN6P56747 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.2■□□□□ 0.34
CLDN6P56747 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN6P56747 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.2■□□□□ 0.34
CLDN6P56747 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN6P56747 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN6P56747 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.2■□□□□ 0.34
CLDN6P56747 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN6P56747 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN6P56747 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.2■□□□□ 0.34
CLDN6P56747 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN6P56747 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN6P56747 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN6P56747 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN6P56747 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN6P56747 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CLDN6P56747 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN6P56747 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.19■□□□□ 0.34
CLDN6P56747 AL020996.1-203ENST00000536896 2307 ntBASIC17.19■□□□□ 0.34
CLDN6P56747 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN6P56747 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
CLDN6P56747 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN6P56747 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN6P56747 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN6P56747 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.19■□□□□ 0.34
CLDN6P56747 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN6P56747 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CLDN6P56747 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN6P56747 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.19■□□□□ 0.34
CLDN6P56747 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CLDN6P56747 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.19■□□□□ 0.34
CLDN6P56747 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.19■□□□□ 0.34
CLDN6P56747 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.19■□□□□ 0.34
CLDN6P56747 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN6P56747 METTL21AP1-201ENST00000438852 635 ntBASIC17.19■□□□□ 0.34
CLDN6P56747 KRT18P2-201ENST00000447938 1258 ntBASIC17.19■□□□□ 0.34
CLDN6P56747 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.19■□□□□ 0.34
CLDN6P56747 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.19■□□□□ 0.34
CLDN6P56747 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.19■□□□□ 0.34
CLDN6P56747 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.19■□□□□ 0.34
CLDN6P56747 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN6P56747 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN6P56747 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CLDN6P56747 AC098818.2-201ENST00000564925 2320 ntBASIC17.19■□□□□ 0.34
CLDN6P56747 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN6P56747 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN6P56747 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN6P56747 KRT18P28-201ENST00000453838 1332 ntBASIC17.19■□□□□ 0.34
CLDN6P56747 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN6P56747 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN6P56747 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN6P56747 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN6P56747 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN6P56747 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN6P56747 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms