Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.72■□□□□ 0.59
CDH6P55285 FAM8A6P-201ENST00000407496 1135 ntBASIC18.72■□□□□ 0.59
CDH6P55285 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.72■□□□□ 0.59
CDH6P55285 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH6P55285 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDH6P55285 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.72■□□□□ 0.59
CDH6P55285 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
CDH6P55285 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CDH6P55285 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.72■□□□□ 0.59
CDH6P55285 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDH6P55285 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH6P55285 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH6P55285 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH6P55285 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH6P55285 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDH6P55285 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.72■□□□□ 0.59
CDH6P55285 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CDH6P55285 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH6P55285 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH6P55285 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDH6P55285 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CDH6P55285 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH6P55285 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.71■□□□□ 0.59
CDH6P55285 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
CDH6P55285 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH6P55285 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH6P55285 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDH6P55285 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH6P55285 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH6P55285 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CDH6P55285 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDH6P55285 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH6P55285 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CDH6P55285 FZD10-202ENST00000539839 3282 ntBASIC18.71■□□□□ 0.59
CDH6P55285 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH6P55285 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH6P55285 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH6P55285 KRT18P48-201ENST00000434763 852 ntBASIC18.71■□□□□ 0.59
CDH6P55285 AC104076.2-201ENST00000448912 469 ntBASIC18.71■□□□□ 0.59
CDH6P55285 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDH6P55285 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.71■□□□□ 0.59
CDH6P55285 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.71■□□□□ 0.59
CDH6P55285 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.71■□□□□ 0.59
CDH6P55285 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH6P55285 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.71■□□□□ 0.59
CDH6P55285 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CDH6P55285 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDH6P55285 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CDH6P55285 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH6P55285 AC006116.8-202ENST00000587620 1550 ntBASIC18.71■□□□□ 0.59
CDH6P55285 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH6P55285 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH6P55285 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH6P55285 AC022898.2-201ENST00000616822 1312 ntBASIC18.71■□□□□ 0.59
CDH6P55285 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.71■□□□□ 0.59
CDH6P55285 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH6P55285 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
CDH6P55285 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
CDH6P55285 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH6P55285 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
CDH6P55285 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CDH6P55285 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH6P55285 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH6P55285 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH6P55285 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH6P55285 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH6P55285 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH6P55285 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.7■□□□□ 0.58
CDH6P55285 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH6P55285 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.7■□□□□ 0.58
CDH6P55285 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH6P55285 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.7■□□□□ 0.58
CDH6P55285 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDH6P55285 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CDH6P55285 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.7■□□□□ 0.58
CDH6P55285 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDH6P55285 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.7■□□□□ 0.58
CDH6P55285 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.7■□□□□ 0.58
CDH6P55285 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDH6P55285 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.7■□□□□ 0.58
CDH6P55285 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH6P55285 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.7■□□□□ 0.58
CDH6P55285 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CDH6P55285 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.7■□□□□ 0.58
CDH6P55285 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH6P55285 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH6P55285 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH6P55285 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.69■□□□□ 0.58
CDH6P55285 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH6P55285 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDH6P55285 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.69■□□□□ 0.58
CDH6P55285 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH6P55285 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.69■□□□□ 0.58
CDH6P55285 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CDH6P55285 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH6P55285 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH6P55285 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH6P55285 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDH6P55285 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH6P55285 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms