Protein–RNA interactions for Protein: P48995

TRPC1, Short transient receptor potential channel 1, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPC1P48995 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRPC1P48995 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRPC1P48995 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.35■□□□□ 0.37
TRPC1P48995 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRPC1P48995 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRPC1P48995 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.35■□□□□ 0.37
TRPC1P48995 AC036111.1-201ENST00000533973 1582 ntBASIC17.35■□□□□ 0.37
TRPC1P48995 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.35■□□□□ 0.37
TRPC1P48995 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.35■□□□□ 0.37
TRPC1P48995 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.35■□□□□ 0.37
TRPC1P48995 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRPC1P48995 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRPC1P48995 PRORSD1P-202ENST00000563365 2154 ntBASIC17.35■□□□□ 0.37
TRPC1P48995 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.35■□□□□ 0.37
TRPC1P48995 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRPC1P48995 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRPC1P48995 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TRPC1P48995 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRPC1P48995 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRPC1P48995 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRPC1P48995 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.34■□□□□ 0.37
TRPC1P48995 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRPC1P48995 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRPC1P48995 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRPC1P48995 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRPC1P48995 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRPC1P48995 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRPC1P48995 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.34■□□□□ 0.37
TRPC1P48995 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRPC1P48995 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRPC1P48995 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRPC1P48995 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.34■□□□□ 0.37
TRPC1P48995 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.34■□□□□ 0.37
TRPC1P48995 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
TRPC1P48995 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRPC1P48995 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.34■□□□□ 0.37
TRPC1P48995 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRPC1P48995 SDHAP2-201ENST00000455183 2001 ntBASIC17.34■□□□□ 0.37
TRPC1P48995 AC128688.1-201ENST00000487626 519 ntBASIC17.34■□□□□ 0.37
TRPC1P48995 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRPC1P48995 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.34■□□□□ 0.37
TRPC1P48995 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.34■□□□□ 0.37
TRPC1P48995 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
TRPC1P48995 AC010331.1-201ENST00000611423 582 ntBASIC17.34■□□□□ 0.37
TRPC1P48995 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRPC1P48995 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRPC1P48995 AC009102.3-201ENST00000623118 1491 ntBASIC17.34■□□□□ 0.37
TRPC1P48995 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.34■□□□□ 0.37
TRPC1P48995 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRPC1P48995 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRPC1P48995 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRPC1P48995 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TRPC1P48995 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRPC1P48995 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRPC1P48995 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.33■□□□□ 0.37
TRPC1P48995 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRPC1P48995 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRPC1P48995 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.33■□□□□ 0.37
TRPC1P48995 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRPC1P48995 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.33■□□□□ 0.37
TRPC1P48995 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.33■□□□□ 0.37
TRPC1P48995 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.33■□□□□ 0.37
TRPC1P48995 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRPC1P48995 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
TRPC1P48995 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRPC1P48995 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRPC1P48995 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TRPC1P48995 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRPC1P48995 KRT8P7-201ENST00000533003 1432 ntBASIC17.33■□□□□ 0.36
TRPC1P48995 HOXB1-202ENST00000577092 1414 ntBASIC17.33■□□□□ 0.36
TRPC1P48995 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRPC1P48995 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRPC1P48995 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRPC1P48995 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRPC1P48995 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TRPC1P48995 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRPC1P48995 TERF1P1-201ENST00000311003 1181 ntBASIC17.33■□□□□ 0.36
TRPC1P48995 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRPC1P48995 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TRPC1P48995 LIN28AP1-201ENST00000429574 405 ntBASIC17.33■□□□□ 0.36
TRPC1P48995 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.33■□□□□ 0.36
TRPC1P48995 ATP5G1P1-201ENST00000448724 379 ntBASIC17.33■□□□□ 0.36
TRPC1P48995 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.33■□□□□ 0.36
TRPC1P48995 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.33■□□□□ 0.36
TRPC1P48995 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.33■□□□□ 0.36
TRPC1P48995 AC116562.4-202ENST00000641738 218 ntBASIC17.33■□□□□ 0.36
TRPC1P48995 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.33■□□□□ 0.36
TRPC1P48995 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
TRPC1P48995 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.33■□□□□ 0.36
TRPC1P48995 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRPC1P48995 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TRPC1P48995 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TRPC1P48995 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.33■□□□□ 0.36
TRPC1P48995 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRPC1P48995 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
TRPC1P48995 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRPC1P48995 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRPC1P48995 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRPC1P48995 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.32■□□□□ 0.36
TRPC1P48995 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms