Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCP4P48539 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.32□□□□□ -0.44
PCP4P48539 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCP4P48539 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCP4P48539 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
PCP4P48539 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCP4P48539 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCP4P48539 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC12.32□□□□□ -0.44
PCP4P48539 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
PCP4P48539 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCP4P48539 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.32□□□□□ -0.44
PCP4P48539 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCP4P48539 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
PCP4P48539 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCP4P48539 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCP4P48539 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCP4P48539 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCP4P48539 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
PCP4P48539 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCP4P48539 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCP4P48539 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCP4P48539 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCP4P48539 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCP4P48539 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.32□□□□□ -0.44
PCP4P48539 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCP4P48539 C18orf15-201ENST00000623680 2534 ntBASIC12.32□□□□□ -0.44
PCP4P48539 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PCP4P48539 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
PCP4P48539 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCP4P48539 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.31□□□□□ -0.44
PCP4P48539 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCP4P48539 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PCP4P48539 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
PCP4P48539 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCP4P48539 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
PCP4P48539 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC12.31□□□□□ -0.44
PCP4P48539 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCP4P48539 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.31□□□□□ -0.44
PCP4P48539 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCP4P48539 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCP4P48539 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PCP4P48539 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCP4P48539 AP001972.5-201ENST00000624624 2338 ntBASIC12.31□□□□□ -0.44
PCP4P48539 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCP4P48539 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
PCP4P48539 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCP4P48539 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
PCP4P48539 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
PCP4P48539 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.31□□□□□ -0.44
PCP4P48539 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
PCP4P48539 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCP4P48539 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC12.31□□□□□ -0.44
PCP4P48539 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
PCP4P48539 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCP4P48539 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCP4P48539 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCP4P48539 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC12.31□□□□□ -0.44
PCP4P48539 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCP4P48539 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
PCP4P48539 AC090877.2-201ENST00000558441 1738 ntBASIC12.31□□□□□ -0.44
PCP4P48539 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PCP4P48539 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC12.31□□□□□ -0.44
PCP4P48539 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.31□□□□□ -0.44
PCP4P48539 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCP4P48539 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
PCP4P48539 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
PCP4P48539 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PCP4P48539 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCP4P48539 AL162741.1-201ENST00000565563 1558 ntBASIC12.3□□□□□ -0.44
PCP4P48539 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCP4P48539 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PCP4P48539 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCP4P48539 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCP4P48539 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCP4P48539 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
PCP4P48539 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCP4P48539 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PCP4P48539 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.3□□□□□ -0.44
PCP4P48539 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.3□□□□□ -0.44
PCP4P48539 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCP4P48539 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PCP4P48539 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PCP4P48539 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
PCP4P48539 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCP4P48539 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCP4P48539 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCP4P48539 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCP4P48539 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC12.3□□□□□ -0.44
PCP4P48539 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCP4P48539 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
PCP4P48539 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC12.3□□□□□ -0.44
PCP4P48539 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
PCP4P48539 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC12.3□□□□□ -0.44
PCP4P48539 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.3□□□□□ -0.44
PCP4P48539 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.3□□□□□ -0.44
PCP4P48539 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.3□□□□□ -0.44
PCP4P48539 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.3□□□□□ -0.44
PCP4P48539 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PCP4P48539 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
PCP4P48539 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms