Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
MMP13P45452 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MMP13P45452 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
MMP13P45452 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
MMP13P45452 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MMP13P45452 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MMP13P45452 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MMP13P45452 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MMP13P45452 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MMP13P45452 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MMP13P45452 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.7■□□□□ 0.58
MMP13P45452 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
MMP13P45452 RASA4DP-201ENST00000460726 1199 ntBASIC18.7■□□□□ 0.58
MMP13P45452 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.7■□□□□ 0.58
MMP13P45452 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
MMP13P45452 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MMP13P45452 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
MMP13P45452 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MMP13P45452 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MMP13P45452 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.7■□□□□ 0.58
MMP13P45452 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MMP13P45452 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.7■□□□□ 0.58
MMP13P45452 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.69■□□□□ 0.58
MMP13P45452 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
MMP13P45452 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MMP13P45452 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MMP13P45452 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MMP13P45452 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MMP13P45452 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MMP13P45452 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MMP13P45452 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MMP13P45452 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
MMP13P45452 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.69■□□□□ 0.58
MMP13P45452 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MMP13P45452 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MMP13P45452 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MMP13P45452 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MMP13P45452 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MMP13P45452 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.69■□□□□ 0.58
MMP13P45452 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MMP13P45452 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MMP13P45452 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MMP13P45452 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MMP13P45452 STARP1-201ENST00000397973 869 ntBASIC18.69■□□□□ 0.58
MMP13P45452 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
MMP13P45452 FAM210CP-201ENST00000445714 574 ntBASIC18.69■□□□□ 0.58
MMP13P45452 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MMP13P45452 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MMP13P45452 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
MMP13P45452 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.69■□□□□ 0.58
MMP13P45452 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.69■□□□□ 0.58
MMP13P45452 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MMP13P45452 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MMP13P45452 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.69■□□□□ 0.58
MMP13P45452 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MMP13P45452 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
MMP13P45452 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.69■□□□□ 0.58
MMP13P45452 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
MMP13P45452 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MMP13P45452 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MMP13P45452 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
MMP13P45452 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP13P45452 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
MMP13P45452 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP13P45452 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP13P45452 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
MMP13P45452 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP13P45452 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.68■□□□□ 0.58
MMP13P45452 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP13P45452 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP13P45452 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP13P45452 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MMP13P45452 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP13P45452 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MMP13P45452 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP13P45452 SPDYE15P-201ENST00000424157 909 ntBASIC18.68■□□□□ 0.58
MMP13P45452 HOMER2P1-201ENST00000455653 964 ntBASIC18.68■□□□□ 0.58
MMP13P45452 AC092647.4-201ENST00000457211 535 ntBASIC18.68■□□□□ 0.58
MMP13P45452 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.68■□□□□ 0.58
MMP13P45452 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.68■□□□□ 0.58
MMP13P45452 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.68■□□□□ 0.58
MMP13P45452 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP13P45452 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
MMP13P45452 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
MMP13P45452 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP13P45452 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP13P45452 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.68■□□□□ 0.58
MMP13P45452 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
MMP13P45452 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP13P45452 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP13P45452 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
MMP13P45452 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP13P45452 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.68■□□□□ 0.58
MMP13P45452 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP13P45452 GMCL1P1-201ENST00000463439 1581 ntBASIC18.68■□□□□ 0.58
MMP13P45452 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP13P45452 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP13P45452 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP13P45452 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
MMP13P45452 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms