Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPA3P35244 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.19■□□□□ 0.5
RPA3P35244 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RPA3P35244 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.19■□□□□ 0.5
RPA3P35244 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.19■□□□□ 0.5
RPA3P35244 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RPA3P35244 AC007663.1-201ENST00000438948 1240 ntBASIC18.19■□□□□ 0.5
RPA3P35244 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.19■□□□□ 0.5
RPA3P35244 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.19■□□□□ 0.5
RPA3P35244 AP003041.3-201ENST00000527151 707 ntBASIC18.19■□□□□ 0.5
RPA3P35244 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.19■□□□□ 0.5
RPA3P35244 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RPA3P35244 AC092338.2-201ENST00000568827 1415 ntBASIC18.19■□□□□ 0.5
RPA3P35244 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.19■□□□□ 0.5
RPA3P35244 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.19■□□□□ 0.5
RPA3P35244 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.19■□□□□ 0.5
RPA3P35244 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPA3P35244 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPA3P35244 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RPA3P35244 KRT18P22-201ENST00000402024 1347 ntBASIC18.19■□□□□ 0.5
RPA3P35244 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPA3P35244 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPA3P35244 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPA3P35244 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPA3P35244 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RPA3P35244 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.18■□□□□ 0.5
RPA3P35244 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.18■□□□□ 0.5
RPA3P35244 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPA3P35244 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPA3P35244 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.18■□□□□ 0.5
RPA3P35244 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPA3P35244 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.18■□□□□ 0.5
RPA3P35244 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.18■□□□□ 0.5
RPA3P35244 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RPA3P35244 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPA3P35244 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPA3P35244 AL023284.2-201ENST00000405850 579 ntBASIC18.18■□□□□ 0.5
RPA3P35244 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.18■□□□□ 0.5
RPA3P35244 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.18■□□□□ 0.5
RPA3P35244 AC010653.2-201ENST00000623505 997 ntBASIC18.18■□□□□ 0.5
RPA3P35244 AC093010.1-201ENST00000473625 1624 ntBASIC18.18■□□□□ 0.5
RPA3P35244 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPA3P35244 AL355312.1-201ENST00000407115 2176 ntBASIC18.18■□□□□ 0.5
RPA3P35244 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPA3P35244 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPA3P35244 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.18■□□□□ 0.5
RPA3P35244 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPA3P35244 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPA3P35244 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.17■□□□□ 0.5
RPA3P35244 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.17■□□□□ 0.5
RPA3P35244 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPA3P35244 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPA3P35244 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RPA3P35244 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPA3P35244 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPA3P35244 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RPA3P35244 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPA3P35244 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPA3P35244 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.17■□□□□ 0.5
RPA3P35244 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RPA3P35244 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RPA3P35244 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RPA3P35244 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPA3P35244 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RPA3P35244 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.17■□□□□ 0.5
RPA3P35244 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.17■□□□□ 0.5
RPA3P35244 MCCD1P1-208ENST00000445732 328 ntBASIC18.17■□□□□ 0.5
RPA3P35244 ECEL1P2-202ENST00000465689 757 ntBASIC18.17■□□□□ 0.5
RPA3P35244 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.17■□□□□ 0.5
RPA3P35244 AC145285.6-201ENST00000604632 637 ntBASIC18.17■□□□□ 0.5
RPA3P35244 GPAT2P1-201ENST00000444924 1672 ntBASIC18.17■□□□□ 0.5
RPA3P35244 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPA3P35244 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.17■□□□□ 0.5
RPA3P35244 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
RPA3P35244 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPA3P35244 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RPA3P35244 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RPA3P35244 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RPA3P35244 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RPA3P35244 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RPA3P35244 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
RPA3P35244 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RPA3P35244 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.17■□□□□ 0.5
RPA3P35244 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RPA3P35244 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RPA3P35244 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPA3P35244 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RPA3P35244 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPA3P35244 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
RPA3P35244 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPA3P35244 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.16■□□□□ 0.5
RPA3P35244 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPA3P35244 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPA3P35244 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPA3P35244 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RPA3P35244 INGX-201ENST00000359239 846 ntBASIC18.16■□□□□ 0.5
RPA3P35244 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RPA3P35244 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.16■□□□□ 0.5
RPA3P35244 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.16■□□□□ 0.5
RPA3P35244 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms