Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PTPN6P29350 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN6P29350 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PTPN6P29350 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN6P29350 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PTPN6P29350 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PTPN6P29350 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN6P29350 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.06■□□□□ 0.32
PTPN6P29350 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN6P29350 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.06■□□□□ 0.32
PTPN6P29350 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN6P29350 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN6P29350 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN6P29350 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN6P29350 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN6P29350 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PTPN6P29350 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.06■□□□□ 0.32
PTPN6P29350 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN6P29350 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN6P29350 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN6P29350 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.06■□□□□ 0.32
PTPN6P29350 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.06■□□□□ 0.32
PTPN6P29350 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN6P29350 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.06■□□□□ 0.32
PTPN6P29350 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.06■□□□□ 0.32
PTPN6P29350 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.06■□□□□ 0.32
PTPN6P29350 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.06■□□□□ 0.32
PTPN6P29350 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PTPN6P29350 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PTPN6P29350 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN6P29350 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN6P29350 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN6P29350 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN6P29350 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN6P29350 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.06■□□□□ 0.32
PTPN6P29350 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN6P29350 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PTPN6P29350 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN6P29350 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN6P29350 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN6P29350 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN6P29350 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.05■□□□□ 0.32
PTPN6P29350 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PTPN6P29350 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN6P29350 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN6P29350 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.05■□□□□ 0.32
PTPN6P29350 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN6P29350 AC009053.2-201ENST00000563701 2365 ntBASIC17.05■□□□□ 0.32
PTPN6P29350 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN6P29350 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
PTPN6P29350 RNF152P1-201ENST00000397754 604 ntBASIC17.05■□□□□ 0.32
PTPN6P29350 AP000523.1-201ENST00000398242 1049 ntBASIC17.05■□□□□ 0.32
PTPN6P29350 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.05■□□□□ 0.32
PTPN6P29350 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.05■□□□□ 0.32
PTPN6P29350 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.05■□□□□ 0.32
PTPN6P29350 AC011558.1-201ENST00000623459 338 ntBASIC17.05■□□□□ 0.32
PTPN6P29350 AL023973.1-201ENST00000624619 620 ntBASIC17.05■□□□□ 0.32
PTPN6P29350 AL031432.5-201ENST00000641059 760 ntBASIC17.05■□□□□ 0.32
PTPN6P29350 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN6P29350 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN6P29350 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN6P29350 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.05■□□□□ 0.32
PTPN6P29350 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN6P29350 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PTPN6P29350 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN6P29350 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN6P29350 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.05■□□□□ 0.32
PTPN6P29350 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.05■□□□□ 0.32
PTPN6P29350 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
PTPN6P29350 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN6P29350 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN6P29350 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PTPN6P29350 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN6P29350 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PTPN6P29350 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN6P29350 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN6P29350 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN6P29350 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN6P29350 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN6P29350 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
PTPN6P29350 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PTPN6P29350 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
PTPN6P29350 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PTPN6P29350 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN6P29350 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PTPN6P29350 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN6P29350 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN6P29350 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN6P29350 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN6P29350 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN6P29350 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPN6P29350 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN6P29350 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN6P29350 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPN6P29350 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPN6P29350 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.04■□□□□ 0.32
PTPN6P29350 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PTPN6P29350 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.04■□□□□ 0.32
PTPN6P29350 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.04■□□□□ 0.32
PTPN6P29350 AC140113.3-201ENST00000605663 199 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms