Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.26■□□□□ 0.35
PTX3P26022 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.26■□□□□ 0.35
PTX3P26022 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.26■□□□□ 0.35
PTX3P26022 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTX3P26022 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.26■□□□□ 0.35
PTX3P26022 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.26■□□□□ 0.35
PTX3P26022 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTX3P26022 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.26■□□□□ 0.35
PTX3P26022 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PTX3P26022 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTX3P26022 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTX3P26022 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.26■□□□□ 0.35
PTX3P26022 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
PTX3P26022 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PTX3P26022 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
PTX3P26022 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTX3P26022 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTX3P26022 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTX3P26022 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTX3P26022 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTX3P26022 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTX3P26022 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.26■□□□□ 0.35
PTX3P26022 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
PTX3P26022 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTX3P26022 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTX3P26022 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTX3P26022 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTX3P26022 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTX3P26022 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTX3P26022 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.25■□□□□ 0.35
PTX3P26022 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTX3P26022 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
PTX3P26022 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PTX3P26022 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PTX3P26022 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PTX3P26022 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTX3P26022 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTX3P26022 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.25■□□□□ 0.35
PTX3P26022 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTX3P26022 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.25■□□□□ 0.35
PTX3P26022 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTX3P26022 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.25■□□□□ 0.35
PTX3P26022 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PTX3P26022 AC063952.2-201ENST00000498792 1227 ntBASIC17.25■□□□□ 0.35
PTX3P26022 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTX3P26022 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.25■□□□□ 0.35
PTX3P26022 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.25■□□□□ 0.35
PTX3P26022 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.25■□□□□ 0.35
PTX3P26022 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PTX3P26022 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.25■□□□□ 0.35
PTX3P26022 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTX3P26022 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTX3P26022 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PTX3P26022 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTX3P26022 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTX3P26022 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PTX3P26022 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTX3P26022 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.25■□□□□ 0.35
PTX3P26022 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTX3P26022 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTX3P26022 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PTX3P26022 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTX3P26022 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PTX3P26022 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PTX3P26022 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTX3P26022 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTX3P26022 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTX3P26022 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTX3P26022 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTX3P26022 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PTX3P26022 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTX3P26022 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTX3P26022 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTX3P26022 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTX3P26022 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PTX3P26022 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTX3P26022 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTX3P26022 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTX3P26022 HBZP1-201ENST00000354915 429 ntBASIC17.24■□□□□ 0.35
PTX3P26022 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTX3P26022 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.24■□□□□ 0.35
PTX3P26022 MIR662-201ENST00000384847 95 ntBASIC17.24■□□□□ 0.35
PTX3P26022 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.24■□□□□ 0.35
PTX3P26022 RCN1P1-201ENST00000400413 996 ntBASIC17.24■□□□□ 0.35
PTX3P26022 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.24■□□□□ 0.35
PTX3P26022 KRT18P38-201ENST00000449496 1282 ntBASIC17.24■□□□□ 0.35
PTX3P26022 AL359075.1-203ENST00000462729 1002 ntBASIC17.24■□□□□ 0.35
PTX3P26022 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PTX3P26022 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.24■□□□□ 0.35
PTX3P26022 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.24■□□□□ 0.35
PTX3P26022 ZNF444P1-201ENST00000559497 298 ntBASIC17.24■□□□□ 0.35
PTX3P26022 LINC01238-205ENST00000567549 1107 ntBASIC17.24■□□□□ 0.35
PTX3P26022 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.24■□□□□ 0.35
PTX3P26022 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.24■□□□□ 0.35
PTX3P26022 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.24■□□□□ 0.35
PTX3P26022 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.24■□□□□ 0.35
PTX3P26022 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTX3P26022 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTX3P26022 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PTX3P26022 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms