Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.12■□□□□ 0.49
CCND1P24385 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCND1P24385 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.12■□□□□ 0.49
CCND1P24385 AC007663.1-201ENST00000438948 1240 ntBASIC18.12■□□□□ 0.49
CCND1P24385 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.12■□□□□ 0.49
CCND1P24385 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.12■□□□□ 0.49
CCND1P24385 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCND1P24385 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
CCND1P24385 AP003041.3-201ENST00000527151 707 ntBASIC18.12■□□□□ 0.49
CCND1P24385 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCND1P24385 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.12■□□□□ 0.49
CCND1P24385 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CCND1P24385 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
CCND1P24385 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CCND1P24385 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.12■□□□□ 0.49
CCND1P24385 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.12■□□□□ 0.49
CCND1P24385 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCND1P24385 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.12■□□□□ 0.49
CCND1P24385 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCND1P24385 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCND1P24385 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCND1P24385 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.12■□□□□ 0.49
CCND1P24385 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCND1P24385 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CCND1P24385 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCND1P24385 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCND1P24385 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCND1P24385 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.12■□□□□ 0.49
CCND1P24385 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCND1P24385 AL356309.3-201ENST00000624132 1934 ntBASIC18.11■□□□□ 0.49
CCND1P24385 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCND1P24385 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.11■□□□□ 0.49
CCND1P24385 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.11■□□□□ 0.49
CCND1P24385 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
CCND1P24385 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCND1P24385 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCND1P24385 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCND1P24385 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCND1P24385 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.11■□□□□ 0.49
CCND1P24385 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.11■□□□□ 0.49
CCND1P24385 AL512604.3-201ENST00000569583 964 ntBASIC18.11■□□□□ 0.49
CCND1P24385 MIR3180-5-201ENST00000583743 153 ntBASIC18.11■□□□□ 0.49
CCND1P24385 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.11■□□□□ 0.49
CCND1P24385 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCND1P24385 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCND1P24385 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCND1P24385 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCND1P24385 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCND1P24385 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCND1P24385 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCND1P24385 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCND1P24385 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
CCND1P24385 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.11■□□□□ 0.49
CCND1P24385 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.11■□□□□ 0.49
CCND1P24385 PKD1P1-201ENST00000458669 6805 ntBASIC18.11■□□□□ 0.49
CCND1P24385 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCND1P24385 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCND1P24385 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCND1P24385 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCND1P24385 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.1■□□□□ 0.49
CCND1P24385 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCND1P24385 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.1■□□□□ 0.49
CCND1P24385 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CCND1P24385 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCND1P24385 PP12613-201ENST00000424958 2230 ntBASIC18.1■□□□□ 0.49
CCND1P24385 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCND1P24385 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCND1P24385 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.1■□□□□ 0.49
CCND1P24385 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCND1P24385 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.1■□□□□ 0.49
CCND1P24385 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCND1P24385 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.1■□□□□ 0.49
CCND1P24385 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCND1P24385 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.1■□□□□ 0.49
CCND1P24385 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
CCND1P24385 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CCND1P24385 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.1■□□□□ 0.49
CCND1P24385 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCND1P24385 AC010947.1-201ENST00000623454 693 ntBASIC18.1■□□□□ 0.49
CCND1P24385 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCND1P24385 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCND1P24385 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCND1P24385 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.1■□□□□ 0.49
CCND1P24385 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.1■□□□□ 0.49
CCND1P24385 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.1■□□□□ 0.49
CCND1P24385 AL357033.4-201ENST00000617703 1807 ntBASIC18.09■□□□□ 0.49
CCND1P24385 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCND1P24385 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CCND1P24385 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.09■□□□□ 0.49
CCND1P24385 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCND1P24385 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCND1P24385 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCND1P24385 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCND1P24385 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CCND1P24385 AL121761.2-201ENST00000598007 1648 ntBASIC18.09■□□□□ 0.49
CCND1P24385 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CCND1P24385 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.09■□□□□ 0.49
CCND1P24385 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CCND1P24385 CYP2D8P-201ENST00000433633 1490 ntBASIC18.09■□□□□ 0.49
CCND1P24385 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms