Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
XPAP23025 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
XPAP23025 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
XPAP23025 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
XPAP23025 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
XPAP23025 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.12■□□□□ 0.49
XPAP23025 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
XPAP23025 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
XPAP23025 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
XPAP23025 KRT17P6-201ENST00000453795 1220 ntBASIC18.12■□□□□ 0.49
XPAP23025 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.12■□□□□ 0.49
XPAP23025 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
XPAP23025 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.12■□□□□ 0.49
XPAP23025 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.12■□□□□ 0.49
XPAP23025 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.12■□□□□ 0.49
XPAP23025 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
XPAP23025 AC090164.3-201ENST00000610780 2143 ntBASIC18.12■□□□□ 0.49
XPAP23025 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
XPAP23025 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.12■□□□□ 0.49
XPAP23025 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
XPAP23025 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
XPAP23025 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
XPAP23025 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
XPAP23025 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
XPAP23025 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.12■□□□□ 0.49
XPAP23025 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
XPAP23025 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
XPAP23025 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
XPAP23025 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
XPAP23025 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
XPAP23025 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.11■□□□□ 0.49
XPAP23025 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
XPAP23025 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
XPAP23025 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
XPAP23025 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
XPAP23025 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
XPAP23025 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
XPAP23025 AC246785.2-201ENST00000432512 513 ntBASIC18.11■□□□□ 0.49
XPAP23025 AC068472.1-201ENST00000474589 881 ntBASIC18.11■□□□□ 0.49
XPAP23025 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
XPAP23025 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.11■□□□□ 0.49
XPAP23025 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
XPAP23025 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
XPAP23025 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
XPAP23025 AC012313.10-201ENST00000623509 926 ntBASIC18.11■□□□□ 0.49
XPAP23025 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.11■□□□□ 0.49
XPAP23025 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
XPAP23025 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
XPAP23025 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.11■□□□□ 0.49
XPAP23025 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.11■□□□□ 0.49
XPAP23025 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
XPAP23025 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
XPAP23025 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
XPAP23025 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
XPAP23025 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
XPAP23025 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
XPAP23025 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.1■□□□□ 0.49
XPAP23025 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
XPAP23025 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.1■□□□□ 0.49
XPAP23025 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.1■□□□□ 0.49
XPAP23025 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.1■□□□□ 0.49
XPAP23025 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
XPAP23025 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
XPAP23025 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
XPAP23025 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
XPAP23025 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
XPAP23025 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.1■□□□□ 0.49
XPAP23025 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
XPAP23025 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
XPAP23025 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
XPAP23025 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
XPAP23025 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
XPAP23025 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
XPAP23025 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.1■□□□□ 0.49
XPAP23025 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
XPAP23025 MTCL1P1-201ENST00000446207 792 ntBASIC18.1■□□□□ 0.49
XPAP23025 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.1■□□□□ 0.49
XPAP23025 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.1■□□□□ 0.49
XPAP23025 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.1■□□□□ 0.49
XPAP23025 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.1■□□□□ 0.49
XPAP23025 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.1■□□□□ 0.49
XPAP23025 LINC01711-201ENST00000598340 967 ntBASIC18.1■□□□□ 0.49
XPAP23025 AC099336.1-202ENST00000602961 463 ntBASIC18.1■□□□□ 0.49
XPAP23025 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.1■□□□□ 0.49
XPAP23025 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
XPAP23025 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
XPAP23025 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
XPAP23025 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.1■□□□□ 0.49
XPAP23025 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
XPAP23025 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
XPAP23025 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
XPAP23025 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
XPAP23025 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
XPAP23025 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
XPAP23025 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
XPAP23025 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.09■□□□□ 0.49
XPAP23025 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
XPAP23025 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
XPAP23025 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
XPAP23025 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms