Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATF1P18846 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.81■□□□□ 0.12
ATF1P18846 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.81■□□□□ 0.12
ATF1P18846 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.81■□□□□ 0.12
ATF1P18846 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATF1P18846 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
ATF1P18846 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATF1P18846 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
ATF1P18846 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.8■□□□□ 0.12
ATF1P18846 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATF1P18846 AC036111.1-201ENST00000533973 1582 ntBASIC15.8■□□□□ 0.12
ATF1P18846 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.8■□□□□ 0.12
ATF1P18846 AL163051.1-201ENST00000569214 1512 ntBASIC15.8■□□□□ 0.12
ATF1P18846 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATF1P18846 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATF1P18846 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.8■□□□□ 0.12
ATF1P18846 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.8■□□□□ 0.12
ATF1P18846 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ATF1P18846 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATF1P18846 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.8■□□□□ 0.12
ATF1P18846 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.8■□□□□ 0.12
ATF1P18846 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATF1P18846 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.8■□□□□ 0.12
ATF1P18846 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.8■□□□□ 0.12
ATF1P18846 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC15.8■□□□□ 0.12
ATF1P18846 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.8■□□□□ 0.12
ATF1P18846 AP005242.2-201ENST00000580065 1175 ntBASIC15.8■□□□□ 0.12
ATF1P18846 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.8■□□□□ 0.12
ATF1P18846 AC026471.5-201ENST00000615068 467 ntBASIC15.8■□□□□ 0.12
ATF1P18846 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATF1P18846 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.8■□□□□ 0.12
ATF1P18846 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATF1P18846 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATF1P18846 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATF1P18846 SDHAP2-201ENST00000455183 2001 ntBASIC15.8■□□□□ 0.12
ATF1P18846 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
ATF1P18846 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATF1P18846 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ATF1P18846 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATF1P18846 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.8■□□□□ 0.12
ATF1P18846 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.79■□□□□ 0.12
ATF1P18846 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATF1P18846 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.79■□□□□ 0.12
ATF1P18846 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATF1P18846 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.79■□□□□ 0.12
ATF1P18846 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
ATF1P18846 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATF1P18846 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATF1P18846 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATF1P18846 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.79■□□□□ 0.12
ATF1P18846 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.79■□□□□ 0.12
ATF1P18846 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.79■□□□□ 0.12
ATF1P18846 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
ATF1P18846 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.79■□□□□ 0.12
ATF1P18846 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC15.79■□□□□ 0.12
ATF1P18846 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATF1P18846 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATF1P18846 MIR149-201ENST00000384879 89 ntBASIC15.79■□□□□ 0.12
ATF1P18846 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.79■□□□□ 0.12
ATF1P18846 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ATF1P18846 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATF1P18846 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATF1P18846 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.79■□□□□ 0.12
ATF1P18846 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
ATF1P18846 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
ATF1P18846 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.79■□□□□ 0.12
ATF1P18846 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.79■□□□□ 0.12
ATF1P18846 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATF1P18846 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATF1P18846 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATF1P18846 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATF1P18846 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.79■□□□□ 0.12
ATF1P18846 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATF1P18846 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
ATF1P18846 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATF1P18846 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATF1P18846 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATF1P18846 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
ATF1P18846 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATF1P18846 AC009102.3-201ENST00000623118 1491 ntBASIC15.78■□□□□ 0.12
ATF1P18846 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATF1P18846 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.78■□□□□ 0.12
ATF1P18846 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.78■□□□□ 0.12
ATF1P18846 CROCCP2-202ENST00000412962 2773 ntBASIC15.78■□□□□ 0.12
ATF1P18846 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATF1P18846 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATF1P18846 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
ATF1P18846 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
ATF1P18846 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ATF1P18846 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
ATF1P18846 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ATF1P18846 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.78■□□□□ 0.12
ATF1P18846 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ATF1P18846 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.78■□□□□ 0.12
ATF1P18846 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.78■□□□□ 0.12
ATF1P18846 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATF1P18846 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
ATF1P18846 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ATF1P18846 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
ATF1P18846 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms