Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 AC010654.1-201ENST00000615722 808 ntBASIC19.46■□□□□ 0.71
SYN1P17600 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.46■□□□□ 0.71
SYN1P17600 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SYN1P17600 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SYN1P17600 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SYN1P17600 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SYN1P17600 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.46■□□□□ 0.71
SYN1P17600 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.7
SYN1P17600 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SYN1P17600 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.45■□□□□ 0.7
SYN1P17600 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SYN1P17600 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SYN1P17600 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SYN1P17600 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SYN1P17600 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SYN1P17600 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.45■□□□□ 0.7
SYN1P17600 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.45■□□□□ 0.7
SYN1P17600 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYN1P17600 TERF1P3-201ENST00000505638 1227 ntBASIC19.45■□□□□ 0.7
SYN1P17600 AC022145.2-201ENST00000598203 171 ntBASIC19.45■□□□□ 0.7
SYN1P17600 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYN1P17600 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYN1P17600 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYN1P17600 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
SYN1P17600 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.45■□□□□ 0.7
SYN1P17600 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
SYN1P17600 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SYN1P17600 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SYN1P17600 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYN1P17600 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SYN1P17600 MYLKP1-201ENST00000509077 1580 ntBASIC19.44■□□□□ 0.7
SYN1P17600 AC010460.3-201ENST00000511359 1579 ntBASIC19.44■□□□□ 0.7
SYN1P17600 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SYN1P17600 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.44■□□□□ 0.7
SYN1P17600 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SYN1P17600 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SYN1P17600 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SYN1P17600 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.44■□□□□ 0.7
SYN1P17600 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SYN1P17600 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYN1P17600 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.44■□□□□ 0.7
SYN1P17600 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SYN1P17600 AC002472.2-201ENST00000442739 958 ntBASIC19.44■□□□□ 0.7
SYN1P17600 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SYN1P17600 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.44■□□□□ 0.7
SYN1P17600 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.44■□□□□ 0.7
SYN1P17600 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.44■□□□□ 0.7
SYN1P17600 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SYN1P17600 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.44■□□□□ 0.7
SYN1P17600 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.44■□□□□ 0.7
SYN1P17600 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYN1P17600 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYN1P17600 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.44■□□□□ 0.7
SYN1P17600 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SYN1P17600 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.44■□□□□ 0.7
SYN1P17600 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYN1P17600 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYN1P17600 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SYN1P17600 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYN1P17600 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYN1P17600 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYN1P17600 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYN1P17600 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SYN1P17600 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYN1P17600 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SYN1P17600 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.43■□□□□ 0.7
SYN1P17600 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.43■□□□□ 0.7
SYN1P17600 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.43■□□□□ 0.7
SYN1P17600 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.43■□□□□ 0.7
SYN1P17600 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.43■□□□□ 0.7
SYN1P17600 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.43■□□□□ 0.7
SYN1P17600 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.43■□□□□ 0.7
SYN1P17600 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.43■□□□□ 0.7
SYN1P17600 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.43■□□□□ 0.7
SYN1P17600 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.43■□□□□ 0.7
SYN1P17600 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.43■□□□□ 0.7
SYN1P17600 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYN1P17600 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.43■□□□□ 0.7
SYN1P17600 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYN1P17600 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.43■□□□□ 0.7
SYN1P17600 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SYN1P17600 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.43■□□□□ 0.7
SYN1P17600 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SYN1P17600 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SYN1P17600 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYN1P17600 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYN1P17600 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYN1P17600 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYN1P17600 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.42■□□□□ 0.7
SYN1P17600 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYN1P17600 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SYN1P17600 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SYN1P17600 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.42■□□□□ 0.7
SYN1P17600 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.42■□□□□ 0.7
SYN1P17600 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.42■□□□□ 0.7
SYN1P17600 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYN1P17600 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SYN1P17600 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYN1P17600 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYN1P17600 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms