Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H2AFXP16104 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.66■□□□□ 0.58
H2AFXP16104 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H2AFXP16104 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
H2AFXP16104 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
H2AFXP16104 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.66■□□□□ 0.58
H2AFXP16104 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H2AFXP16104 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
H2AFXP16104 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
H2AFXP16104 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
H2AFXP16104 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.66■□□□□ 0.58
H2AFXP16104 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.66■□□□□ 0.58
H2AFXP16104 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
H2AFXP16104 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2AFXP16104 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
H2AFXP16104 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
H2AFXP16104 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2AFXP16104 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.65■□□□□ 0.58
H2AFXP16104 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
H2AFXP16104 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2AFXP16104 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2AFXP16104 AL136379.1-201ENST00000623471 2642 ntBASIC18.65■□□□□ 0.58
H2AFXP16104 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
H2AFXP16104 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
H2AFXP16104 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2AFXP16104 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2AFXP16104 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2AFXP16104 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
H2AFXP16104 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
H2AFXP16104 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
H2AFXP16104 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
H2AFXP16104 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2AFXP16104 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2AFXP16104 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2AFXP16104 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
H2AFXP16104 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2AFXP16104 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
H2AFXP16104 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.65■□□□□ 0.58
H2AFXP16104 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.65■□□□□ 0.58
H2AFXP16104 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2AFXP16104 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2AFXP16104 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
H2AFXP16104 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2AFXP16104 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2AFXP16104 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2AFXP16104 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
H2AFXP16104 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2AFXP16104 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2AFXP16104 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
H2AFXP16104 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2AFXP16104 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2AFXP16104 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
H2AFXP16104 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
H2AFXP16104 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
H2AFXP16104 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
H2AFXP16104 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
H2AFXP16104 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.64■□□□□ 0.58
H2AFXP16104 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.64■□□□□ 0.58
H2AFXP16104 PAUPAR-201ENST00000630360 2965 ntBASIC18.64■□□□□ 0.57
H2AFXP16104 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.64■□□□□ 0.57
H2AFXP16104 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.64■□□□□ 0.57
H2AFXP16104 GPAT2P1-201ENST00000444924 1672 ntBASIC18.64■□□□□ 0.57
H2AFXP16104 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
H2AFXP16104 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.64■□□□□ 0.57
H2AFXP16104 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
H2AFXP16104 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
H2AFXP16104 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
H2AFXP16104 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
H2AFXP16104 MIR149-201ENST00000384879 89 ntBASIC18.64■□□□□ 0.57
H2AFXP16104 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.64■□□□□ 0.57
H2AFXP16104 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
H2AFXP16104 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.64■□□□□ 0.57
H2AFXP16104 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
H2AFXP16104 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.64■□□□□ 0.57
H2AFXP16104 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
H2AFXP16104 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
H2AFXP16104 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
H2AFXP16104 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
H2AFXP16104 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
H2AFXP16104 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
H2AFXP16104 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
H2AFXP16104 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.64■□□□□ 0.57
H2AFXP16104 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
H2AFXP16104 AC104640.1-201ENST00000562617 2109 ntBASIC18.64■□□□□ 0.57
H2AFXP16104 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
H2AFXP16104 AL163051.1-201ENST00000569214 1512 ntBASIC18.64■□□□□ 0.57
H2AFXP16104 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.64■□□□□ 0.57
H2AFXP16104 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.64■□□□□ 0.57
H2AFXP16104 AL662844.4-201ENST00000606367 2838 ntBASIC18.64■□□□□ 0.57
H2AFXP16104 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
H2AFXP16104 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
H2AFXP16104 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
H2AFXP16104 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
H2AFXP16104 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2AFXP16104 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
H2AFXP16104 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2AFXP16104 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
H2AFXP16104 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2AFXP16104 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2AFXP16104 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms