Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.72■□□□□ 0.75
ITGA4P13612 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ITGA4P13612 AC073592.3-201ENST00000625118 1834 ntBASIC19.72■□□□□ 0.75
ITGA4P13612 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ITGA4P13612 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.72■□□□□ 0.75
ITGA4P13612 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ITGA4P13612 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ITGA4P13612 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
ITGA4P13612 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ITGA4P13612 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.72■□□□□ 0.75
ITGA4P13612 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.72■□□□□ 0.75
ITGA4P13612 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.72■□□□□ 0.75
ITGA4P13612 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.72■□□□□ 0.75
ITGA4P13612 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.72■□□□□ 0.75
ITGA4P13612 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.72■□□□□ 0.75
ITGA4P13612 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ITGA4P13612 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.72■□□□□ 0.75
ITGA4P13612 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.72■□□□□ 0.75
ITGA4P13612 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.72■□□□□ 0.75
ITGA4P13612 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.72■□□□□ 0.75
ITGA4P13612 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ITGA4P13612 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.72■□□□□ 0.75
ITGA4P13612 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ITGA4P13612 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ITGA4P13612 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ITGA4P13612 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ITGA4P13612 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ITGA4P13612 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ITGA4P13612 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ITGA4P13612 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.72■□□□□ 0.75
ITGA4P13612 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ITGA4P13612 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ITGA4P13612 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITGA4P13612 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITGA4P13612 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
ITGA4P13612 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
ITGA4P13612 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITGA4P13612 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.71■□□□□ 0.75
ITGA4P13612 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITGA4P13612 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITGA4P13612 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ITGA4P13612 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITGA4P13612 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ITGA4P13612 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
ITGA4P13612 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.71■□□□□ 0.75
ITGA4P13612 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.71■□□□□ 0.75
ITGA4P13612 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
ITGA4P13612 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.71■□□□□ 0.75
ITGA4P13612 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ITGA4P13612 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.71■□□□□ 0.75
ITGA4P13612 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITGA4P13612 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.71■□□□□ 0.75
ITGA4P13612 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ITGA4P13612 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITGA4P13612 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITGA4P13612 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA4P13612 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.7■□□□□ 0.74
ITGA4P13612 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
ITGA4P13612 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.7■□□□□ 0.74
ITGA4P13612 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA4P13612 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA4P13612 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA4P13612 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA4P13612 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ITGA4P13612 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA4P13612 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA4P13612 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA4P13612 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA4P13612 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.7■□□□□ 0.74
ITGA4P13612 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA4P13612 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.7■□□□□ 0.74
ITGA4P13612 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.7■□□□□ 0.74
ITGA4P13612 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.7■□□□□ 0.74
ITGA4P13612 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.7■□□□□ 0.74
ITGA4P13612 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA4P13612 AL353801.3-201ENST00000609898 542 ntBASIC19.7■□□□□ 0.74
ITGA4P13612 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA4P13612 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ITGA4P13612 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
ITGA4P13612 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.7■□□□□ 0.74
ITGA4P13612 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA4P13612 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ITGA4P13612 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ITGA4P13612 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ITGA4P13612 AP000997.3-201ENST00000623333 2250 ntBASIC19.69■□□□□ 0.74
ITGA4P13612 LINC01126-201ENST00000623515 1646 ntBASIC19.69■□□□□ 0.74
ITGA4P13612 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.69■□□□□ 0.74
ITGA4P13612 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ITGA4P13612 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ITGA4P13612 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.69■□□□□ 0.74
ITGA4P13612 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ITGA4P13612 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
ITGA4P13612 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ITGA4P13612 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ITGA4P13612 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ITGA4P13612 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ITGA4P13612 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ITGA4P13612 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.69■□□□□ 0.74
ITGA4P13612 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.69■□□□□ 0.74
ITGA4P13612 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms