Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TIMP1P01033 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.33■□□□□ 0.68
TIMP1P01033 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TIMP1P01033 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.32■□□□□ 0.68
TIMP1P01033 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
TIMP1P01033 SIRPAP1-201ENST00000448467 1770 ntBASIC19.32■□□□□ 0.68
TIMP1P01033 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TIMP1P01033 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.32■□□□□ 0.68
TIMP1P01033 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.32■□□□□ 0.68
TIMP1P01033 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.32■□□□□ 0.68
TIMP1P01033 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.32■□□□□ 0.68
TIMP1P01033 RHOQP3-201ENST00000437982 621 ntBASIC19.32■□□□□ 0.68
TIMP1P01033 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.32■□□□□ 0.68
TIMP1P01033 SIGLEC30P-201ENST00000455569 941 ntBASIC19.32■□□□□ 0.68
TIMP1P01033 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.32■□□□□ 0.68
TIMP1P01033 AC074386.1-202ENST00000463561 864 ntBASIC19.32■□□□□ 0.68
TIMP1P01033 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TIMP1P01033 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TIMP1P01033 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.32■□□□□ 0.68
TIMP1P01033 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.32■□□□□ 0.68
TIMP1P01033 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.32■□□□□ 0.68
TIMP1P01033 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.32■□□□□ 0.68
TIMP1P01033 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.32■□□□□ 0.68
TIMP1P01033 AC004835.2-201ENST00000603762 682 ntBASIC19.32■□□□□ 0.68
TIMP1P01033 AL805961.1-202ENST00000641562 540 ntBASIC19.32■□□□□ 0.68
TIMP1P01033 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.32■□□□□ 0.68
TIMP1P01033 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.32■□□□□ 0.68
TIMP1P01033 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TIMP1P01033 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TIMP1P01033 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TIMP1P01033 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TIMP1P01033 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.32■□□□□ 0.68
TIMP1P01033 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TIMP1P01033 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TIMP1P01033 AL049757.1-201ENST00000616842 1596 ntBASIC19.32■□□□□ 0.68
TIMP1P01033 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.32■□□□□ 0.68
TIMP1P01033 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TIMP1P01033 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TIMP1P01033 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TIMP1P01033 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
TIMP1P01033 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TIMP1P01033 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TIMP1P01033 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TIMP1P01033 AC005082.1-201ENST00000413042 2259 ntBASIC19.31■□□□□ 0.68
TIMP1P01033 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TIMP1P01033 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TIMP1P01033 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TIMP1P01033 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TIMP1P01033 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TIMP1P01033 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.31■□□□□ 0.68
TIMP1P01033 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TIMP1P01033 AC092474.2-201ENST00000424288 719 ntBASIC19.31■□□□□ 0.68
TIMP1P01033 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.31■□□□□ 0.68
TIMP1P01033 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.31■□□□□ 0.68
TIMP1P01033 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TIMP1P01033 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
TIMP1P01033 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.31■□□□□ 0.68
TIMP1P01033 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TIMP1P01033 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TIMP1P01033 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TIMP1P01033 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TIMP1P01033 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TIMP1P01033 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TIMP1P01033 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TIMP1P01033 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TIMP1P01033 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.31■□□□□ 0.68
TIMP1P01033 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TIMP1P01033 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TIMP1P01033 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.31■□□□□ 0.68
TIMP1P01033 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TIMP1P01033 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.3■□□□□ 0.68
TIMP1P01033 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TIMP1P01033 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.3■□□□□ 0.68
TIMP1P01033 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
TIMP1P01033 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
TIMP1P01033 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
TIMP1P01033 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TIMP1P01033 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TIMP1P01033 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TIMP1P01033 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TIMP1P01033 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TIMP1P01033 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.3■□□□□ 0.68
TIMP1P01033 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.3■□□□□ 0.68
TIMP1P01033 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.3■□□□□ 0.68
TIMP1P01033 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.3■□□□□ 0.68
TIMP1P01033 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.3■□□□□ 0.68
TIMP1P01033 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.3■□□□□ 0.68
TIMP1P01033 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.3■□□□□ 0.68
TIMP1P01033 AL513210.1-201ENST00000629608 234 ntBASIC19.3■□□□□ 0.68
TIMP1P01033 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
TIMP1P01033 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TIMP1P01033 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TIMP1P01033 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.3■□□□□ 0.68
TIMP1P01033 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.3■□□□□ 0.68
TIMP1P01033 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TIMP1P01033 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TIMP1P01033 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
TIMP1P01033 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.3■□□□□ 0.68
TIMP1P01033 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TIMP1P01033 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms