Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 MIR3687-1-201ENST00000614492 61 ntBASIC23.66■■□□□ 1.38
LTN1O94822 AL513190.1-201ENST00000621254 727 ntBASIC23.66■■□□□ 1.38
LTN1O94822 AC005593.1-201ENST00000624894 515 ntBASIC23.66■■□□□ 1.38
LTN1O94822 AC092865.6-201ENST00000642101 219 ntBASIC23.66■■□□□ 1.38
LTN1O94822 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC23.65■■□□□ 1.38
LTN1O94822 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LTN1O94822 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC23.65■■□□□ 1.38
LTN1O94822 COX5A-206ENST00000568783 571 ntTSL 3 BASIC23.65■■□□□ 1.38
LTN1O94822 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC23.65■■□□□ 1.38
LTN1O94822 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LTN1O94822 AC022898.2-201ENST00000616822 1312 ntBASIC23.65■■□□□ 1.38
LTN1O94822 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
LTN1O94822 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LTN1O94822 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LTN1O94822 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC23.65■■□□□ 1.38
LTN1O94822 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
LTN1O94822 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
LTN1O94822 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
LTN1O94822 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC23.65■■□□□ 1.38
LTN1O94822 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
LTN1O94822 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC23.65■■□□□ 1.38
LTN1O94822 YBX1P5-201ENST00000509441 847 ntBASIC23.65■■□□□ 1.38
LTN1O94822 AC109462.3-201ENST00000573934 613 ntBASIC23.65■■□□□ 1.38
LTN1O94822 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC23.65■■□□□ 1.38
LTN1O94822 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
LTN1O94822 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC23.65■■□□□ 1.38
LTN1O94822 POR-209ENST00000439269 1858 ntTSL 2 BASIC23.65■■□□□ 1.38
LTN1O94822 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LTN1O94822 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
LTN1O94822 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
LTN1O94822 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
LTN1O94822 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC23.64■■□□□ 1.38
LTN1O94822 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC23.64■■□□□ 1.38
LTN1O94822 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
LTN1O94822 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC23.64■■□□□ 1.37
LTN1O94822 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
LTN1O94822 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
LTN1O94822 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
LTN1O94822 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.37
LTN1O94822 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
LTN1O94822 RPS15P9-201ENST00000494093 319 ntBASIC23.64■■□□□ 1.37
LTN1O94822 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC23.64■■□□□ 1.37
LTN1O94822 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
LTN1O94822 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC23.64■■□□□ 1.37
LTN1O94822 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
LTN1O94822 AL049757.1-201ENST00000616842 1596 ntBASIC23.64■■□□□ 1.37
LTN1O94822 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC23.64■■□□□ 1.37
LTN1O94822 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
LTN1O94822 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
LTN1O94822 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
LTN1O94822 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
LTN1O94822 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LTN1O94822 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LTN1O94822 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LTN1O94822 AC003669.1-201ENST00000334569 611 ntBASIC23.63■■□□□ 1.37
LTN1O94822 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
LTN1O94822 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LTN1O94822 HTR5BP-201ENST00000430851 1154 ntBASIC23.63■■□□□ 1.37
LTN1O94822 DDX43P3-201ENST00000441064 443 ntBASIC23.63■■□□□ 1.37
LTN1O94822 NKTR-203ENST00000442970 646 ntTSL 2 BASIC23.63■■□□□ 1.37
LTN1O94822 GID4-202ENST00000376345 1391 ntTSL 3 BASIC23.63■■□□□ 1.37
LTN1O94822 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LTN1O94822 AC009949.1-201ENST00000623048 1830 ntBASIC23.63■■□□□ 1.37
LTN1O94822 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LTN1O94822 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
LTN1O94822 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
LTN1O94822 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LTN1O94822 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
LTN1O94822 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
LTN1O94822 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC23.63■■□□□ 1.37
LTN1O94822 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LTN1O94822 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LTN1O94822 IGLL3P-201ENST00000412472 434 ntBASIC23.63■■□□□ 1.37
LTN1O94822 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC23.63■■□□□ 1.37
LTN1O94822 CFL1-202ENST00000524553 860 ntTSL 2 BASIC23.63■■□□□ 1.37
LTN1O94822 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
LTN1O94822 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC23.63■■□□□ 1.37
LTN1O94822 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC23.63■■□□□ 1.37
LTN1O94822 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC23.63■■□□□ 1.37
LTN1O94822 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC23.63■■□□□ 1.37
LTN1O94822 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC23.63■■□□□ 1.37
LTN1O94822 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LTN1O94822 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
LTN1O94822 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LTN1O94822 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LTN1O94822 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
LTN1O94822 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LTN1O94822 PC-208ENST00000529047 1607 ntTSL 3 BASIC23.62■■□□□ 1.37
LTN1O94822 BX276092.7-203ENST00000637198 1536 ntBASIC23.62■■□□□ 1.37
LTN1O94822 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LTN1O94822 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LTN1O94822 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
LTN1O94822 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LTN1O94822 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC23.62■■□□□ 1.37
LTN1O94822 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC23.62■■□□□ 1.37
LTN1O94822 DUTP2-201ENST00000519164 463 ntBASIC23.62■■□□□ 1.37
LTN1O94822 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC23.62■■□□□ 1.37
LTN1O94822 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LTN1O94822 AC018445.3-201ENST00000624177 1945 ntBASIC23.62■■□□□ 1.37
LTN1O94822 AC093677.2-201ENST00000600169 1863 ntBASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms