Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
LGR5O75473 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LGR5O75473 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.9■□□□□ 0.78
LGR5O75473 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.9■□□□□ 0.78
LGR5O75473 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
LGR5O75473 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LGR5O75473 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
LGR5O75473 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LGR5O75473 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LGR5O75473 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LGR5O75473 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
LGR5O75473 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LGR5O75473 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.9■□□□□ 0.78
LGR5O75473 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LGR5O75473 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
LGR5O75473 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LGR5O75473 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LGR5O75473 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.9■□□□□ 0.78
LGR5O75473 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LGR5O75473 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.9■□□□□ 0.78
LGR5O75473 AC122714.2-201ENST00000502787 707 ntBASIC19.9■□□□□ 0.78
LGR5O75473 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LGR5O75473 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.9■□□□□ 0.78
LGR5O75473 AC106730.1-201ENST00000566722 1090 ntBASIC19.9■□□□□ 0.78
LGR5O75473 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.9■□□□□ 0.78
LGR5O75473 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LGR5O75473 AP000867.4-201ENST00000641616 219 ntBASIC19.9■□□□□ 0.78
LGR5O75473 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LGR5O75473 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
LGR5O75473 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LGR5O75473 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
LGR5O75473 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LGR5O75473 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LGR5O75473 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.9■□□□□ 0.78
LGR5O75473 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.9■□□□□ 0.78
LGR5O75473 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.9■□□□□ 0.78
LGR5O75473 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LGR5O75473 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LGR5O75473 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LGR5O75473 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LGR5O75473 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
LGR5O75473 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.89■□□□□ 0.78
LGR5O75473 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LGR5O75473 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LGR5O75473 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
LGR5O75473 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.89■□□□□ 0.77
LGR5O75473 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.89■□□□□ 0.77
LGR5O75473 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LGR5O75473 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LGR5O75473 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LGR5O75473 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LGR5O75473 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LGR5O75473 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.89■□□□□ 0.77
LGR5O75473 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LGR5O75473 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
LGR5O75473 AC073648.2-201ENST00000510116 352 ntBASIC19.89■□□□□ 0.77
LGR5O75473 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.89■□□□□ 0.77
LGR5O75473 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.89■□□□□ 0.77
LGR5O75473 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.89■□□□□ 0.77
LGR5O75473 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
LGR5O75473 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
LGR5O75473 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LGR5O75473 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LGR5O75473 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
LGR5O75473 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LGR5O75473 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LGR5O75473 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.88■□□□□ 0.77
LGR5O75473 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LGR5O75473 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LGR5O75473 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LGR5O75473 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LGR5O75473 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LGR5O75473 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LGR5O75473 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LGR5O75473 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LGR5O75473 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LGR5O75473 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
LGR5O75473 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LGR5O75473 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.88■□□□□ 0.77
LGR5O75473 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LGR5O75473 SCARNA2-201ENST00000458748 420 ntBASIC19.88■□□□□ 0.77
LGR5O75473 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LGR5O75473 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.88■□□□□ 0.77
LGR5O75473 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.88■□□□□ 0.77
LGR5O75473 AC135776.1-201ENST00000319817 2481 ntBASIC19.88■□□□□ 0.77
LGR5O75473 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LGR5O75473 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LGR5O75473 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.88■□□□□ 0.77
LGR5O75473 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LGR5O75473 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LGR5O75473 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LGR5O75473 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.87■□□□□ 0.77
LGR5O75473 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
LGR5O75473 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.87■□□□□ 0.77
LGR5O75473 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.87■□□□□ 0.77
LGR5O75473 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LGR5O75473 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LGR5O75473 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LGR5O75473 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.87■□□□□ 0.77
LGR5O75473 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms